School of Dentistry, Hainan Medical University, Haikou, PR China.
Department of Health Management Center, The First Affiliated Hospital of Hainan Medical University, Haikou, PR. China.
Medicine (Baltimore). 2023 Aug 25;102(34):e34744. doi: 10.1097/MD.0000000000034744.
To analyze the mechanism of Astragalus membranaceus (AM) in molecular level in the oral ulcer (OU) treatment with reference to network pharmacology. Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform database was used in screening the AM active components and AM action targets; GeneCards database was used to screen OU targets; the common target were screened by Venny online tool; Cytoscape software was applied to construct the target gene regulation map of AM active components; STRING database was used to construct the protein-protein interaction network and the key targets were screened as per degree value; gene ontology enrichment and KEGG pathway enrichment of interactive genes were calculated through David database. There were 17 active ingredients and 429 target spots in Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform database. There are 606 target genes for OU in GeneCards database. There are 67 common targets, including 10 key targets: IL10, IL6, TNF, IL1B, CXCL8, CCL2, TLR4, IL4, ICAM1, and IFNG. It involves 30 gene ontology terms and 20 KEGG signal channels. The molecular docking results showed that quercetin and kaempferol had a good binding activity with IL6, IL1B, TNF, and CCL2. Network pharmacological analysis shows that AM can regulate multiple signal pathways through multiple targets to treat OU.
基于网络药理学分析黄芪治疗口腔溃疡的作用机制。运用中药系统药理学数据库和分析平台数据库筛选黄芪的活性成分及作用靶点;运用 GeneCards 数据库筛选口腔溃疡的靶点;利用 Venny 在线工具筛选共有靶点;运用 Cytoscape 软件构建黄芪活性成分作用靶点的基因调控网络图;运用 STRING 数据库构建蛋白-蛋白相互作用网络,并筛选出根据Degree 值的关键靶点;运用 David 数据库对交互基因进行基因本体论富集和京都基因与基因组百科全书通路富集分析。中药系统药理学数据库和分析平台数据库中有 17 种活性成分和 429 个作用靶点;GeneCards 数据库中有 606 个口腔溃疡靶点。有 67 个共有靶点,包括 10 个关键靶点:IL10、IL6、TNF、IL1B、CXCL8、CCL2、TLR4、IL4、ICAM1 和 IFNG。涉及 30 个基因本体论术语和 20 个京都基因与基因组百科全书信号通路。分子对接结果表明,槲皮素和山奈酚与 IL6、IL1B、TNF 和 CCL2 具有良好的结合活性。网络药理学分析表明,黄芪可以通过多个靶点调节多个信号通路来治疗口腔溃疡。