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荧光各向异性和偏振在生物分子缔合过程表征及其在研究 SH2 结构域结合亲和力中的应用。

Fluorescence Anisotropy and Polarization in the Characterization of Biomolecular Association Processes and Their Application to Study SH2 Domain Binding Affinity.

机构信息

Department of Chemical Science and Technologies, University of Rome Tor Vergata, Rome, Italy.

出版信息

Methods Mol Biol. 2023;2705:93-112. doi: 10.1007/978-1-0716-3393-9_6.

DOI:10.1007/978-1-0716-3393-9_6
PMID:37668971
Abstract

Fluorescence anisotropy (or polarization) is a powerful technique to study biomolecular association processes, by following the rotational motions of one of the two partners in the interaction, labeled with a fluorophore. It can be used to determine dissociation constants in solution, down to nM values, and unlabeled ligands can be characterized, too, by using competition experiments. In this chapter, we introduce the basic principles of the technique, compare it with other experimental approaches, and discuss the experimental details with specific examples regarding SH2 domain/phosphopeptide association processes. The experimental protocols to be used in binding experiments and displacement studies are described, as well as the caveats to be considered in performing accurate measurements.

摘要

荧光各向异性(或偏振)是一种强大的技术,可通过跟踪相互作用中标记荧光团的两个伴侣之一的旋转运动,来研究生物分子的结合过程。它可用于确定溶液中的离解常数,低至纳摩尔值,并且可以通过使用竞争实验来表征未标记的配体。在本章中,我们介绍了该技术的基本原理,将其与其他实验方法进行了比较,并结合有关 SH2 结构域/磷酸肽结合过程的具体实例讨论了实验细节。描述了用于结合实验和置换研究的实验方案,以及在进行准确测量时需要考虑的注意事项。

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本文引用的文献

1
Structural Determinants of Phosphopeptide Binding to the N-Terminal Src Homology 2 Domain of the SHP2 Phosphatase.磷酸肽与SHP2磷酸酶N端Src同源2结构域结合的结构决定因素
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Molecular mechanism of SHP2 activation by PD-1 stimulation.PD-1 刺激激活 SHP2 的分子机制。
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Mechanism of Folding and Binding of the N-Terminal SH2 Domain from SHP2.
SHP2 中 N 端 SH2 结构域的折叠与结合机制。
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Using Microscale Thermophoresis to Characterize Hits from High-Throughput Screening: A European Lead Factory Perspective.利用微量热泳动技术从高通量筛选中鉴定命中化合物:欧洲先导化合物工厂的视角。
SLAS Discov. 2018 Mar;23(3):225-241. doi: 10.1177/2472555217744728.
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Insight into the Selectivity of the G7-18NATE Inhibitor Peptide for the Grb7-SH2 Domain Target.深入了解G7-18NATE抑制剂肽对Grb7-SH2结构域靶点的选择性。
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Fluorescence anisotropy (polarization): from drug screening to precision medicine.荧光各向异性(偏振):从药物筛选到精准医学
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Analysis of Phosphorylation-dependent Protein Interactions of Adhesion and Degranulation Promoting Adaptor Protein (ADAP) Reveals Novel Interaction Partners Required for Chemokine-directed T cell Migration.黏附与脱颗粒促进衔接蛋白(ADAP)的磷酸化依赖性蛋白相互作用分析揭示趋化因子导向性T细胞迁移所需的新型相互作用伴侣。
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Measurement of Peptide Binding to MHC Class II Molecules by Fluorescence Polarization.通过荧光偏振测量肽与II类主要组织相容性复合体分子的结合
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Structural insights into Noonan/LEOPARD syndrome-related mutants of protein-tyrosine phosphatase SHP2 (PTPN11).对与努南/豹皮综合征相关的蛋白酪氨酸磷酸酶SHP2(PTPN11)突变体的结构洞察
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