State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic and Developmental Sciences, and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, P. R. China.
Adv Sci (Weinh). 2023 Nov;10(31):e2304318. doi: 10.1002/advs.202304318. Epub 2023 Sep 13.
Modules, toolboxes, and synthetic biology systems may be designed to address environmental bioremediation. However, weak and decentralized functional modules require complex control. To address this issue, an integrated system for toxicant detection and biodegradation, and subsequent suicide in chronological order without exogenous inducers is constructed. Salicylic acid, a typical pollutant in industrial wastewater, is selected as an example to demonstrate this design. Biosensors are optimized by regulating the expression of receptors and reporters to get 2-fold sensitivity and 6-fold maximum output. Several stationary phase promoters are compared, and promoter P is chosen to express the degradation enzyme. Two concepts for suicide circuits are developed, with the toxin/antitoxin circuit showing potent lethality. The three modules are coupled in a stepwise manner. Detection and biodegradation, and suicide are sequentially completed with partial attenuation compared to pre-integration, except for biodegradation, being improved by the replacements of ribosome binding site. Finally, a long-term stability test reveals that the engineered strain maintained its function for ten generations. The study provides a novel concept for integrating and controlling functional modules that can accelerate the transition of synthetic biology from conceptual to practical applications.
模块、工具箱和合成生物学系统可被设计用于解决环境生物修复问题。然而,功能模块的性能较弱且分散,需要进行复杂的控制。为了解决这个问题,构建了一个集成的有毒物质检测和生物降解系统,随后按照时间顺序进行自杀,而无需外源性诱导物。选择水杨酸作为典型的工业废水中的污染物来展示这个设计。通过调节受体和报告基因的表达来优化生物传感器,使其灵敏度提高了 2 倍,最大输出提高了 6 倍。比较了几种固定相启动子,选择启动子 P 来表达降解酶。开发了两种自杀回路的概念,其中毒素/抗毒素回路表现出很强的致死性。三个模块以逐步的方式耦合。除了降解部分的性能因核糖体结合位点的替换而得到改善外,检测、生物降解和自杀都依次完成,与预整合相比,衰减程度部分降低。最后,进行了长期稳定性测试,结果表明工程菌株在十代内保持其功能。该研究为整合和控制功能模块提供了一个新的概念,这可以加速合成生物学从概念到实际应用的转变。