• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

U型纯变压器医学图像分割网络的优化

Optimization of U-shaped pure transformer medical image segmentation network.

作者信息

Dan Yongping, Jin Weishou, Wang Zhida, Sun Changhao

机构信息

School of Electronic and Information, Zhongyuan University of Technology, Zhengzhou, Henan, China.

出版信息

PeerJ Comput Sci. 2023 Aug 18;9:e1515. doi: 10.7717/peerj-cs.1515. eCollection 2023.

DOI:10.7717/peerj-cs.1515
PMID:37705654
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10495965/
Abstract

In recent years, neural networks have made pioneering achievements in the field of medical imaging. In particular, deep neural networks based on U-shaped structures are widely used in different medical image segmentation tasks. In order to improve the early diagnosis and clinical decision-making system of lung diseases, it has become a key step to use the neural network for lung segmentation to assist in positioning and observing the shape. There is still the problem of low precision. For the sake of achieving better segmentation accuracy, an optimized pure Transformer U-shaped segmentation is proposed in this article. The optimization segmentation network adopts the method of adding skip connections and performing special splicing processing, which reduces the information loss in the encoding process and increases the information in the decoding process, so as to achieve the purpose of improving the segmentation accuracy. The final experiment shows that our improved network achieves 97.86% accuracy in segmentation of the "Chest Xray Masks and Labels" dataset, which is better than the full convolutional network or the combination of Transformer and convolution.

摘要

近年来,神经网络在医学成像领域取得了开创性成就。特别是,基于U形结构的深度神经网络被广泛应用于不同的医学图像分割任务中。为了改进肺部疾病的早期诊断和临床决策系统,利用神经网络进行肺部分割以辅助定位和观察形状已成为关键步骤。但仍存在精度较低的问题。为了实现更好的分割精度,本文提出了一种优化的纯Transformer U形分割方法。优化后的分割网络采用添加跳跃连接和进行特殊拼接处理的方法,减少了编码过程中的信息损失,增加了解码过程中的信息,从而达到提高分割精度的目的。最终实验表明,我们改进后的网络在“胸部X光掩码和标签”数据集的分割中准确率达到了97.86%,优于全卷积网络或Transformer与卷积的组合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d72/10495965/20f133e31446/peerj-cs-09-1515-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d72/10495965/20f133e31446/peerj-cs-09-1515-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d72/10495965/20f133e31446/peerj-cs-09-1515-g003.jpg

相似文献

1
Optimization of U-shaped pure transformer medical image segmentation network.U型纯变压器医学图像分割网络的优化
PeerJ Comput Sci. 2023 Aug 18;9:e1515. doi: 10.7717/peerj-cs.1515. eCollection 2023.
2
Dual encoder network with transformer-CNN for multi-organ segmentation.基于 Transformer-CNN 的双编码器网络的多器官分割。
Med Biol Eng Comput. 2023 Mar;61(3):661-671. doi: 10.1007/s11517-022-02723-9. Epub 2022 Dec 29.
3
MBUTransNet: multi-branch U-shaped network fusion transformer architecture for medical image segmentation.MBUTransNet:用于医学图像分割的多分支 U 形网络融合变压器架构。
Int J Comput Assist Radiol Surg. 2023 Oct;18(10):1895-1902. doi: 10.1007/s11548-023-02879-1. Epub 2023 Apr 6.
4
SWTRU: Star-shaped Window Transformer Reinforced U-Net for medical image segmentation.SWTRU:星型窗口变换增强 U-Net 用于医学图像分割。
Comput Biol Med. 2022 Nov;150:105954. doi: 10.1016/j.compbiomed.2022.105954. Epub 2022 Aug 13.
5
Advantages of transformer and its application for medical image segmentation: a survey.Transformer 的优势及其在医学图像分割中的应用:综述。
Biomed Eng Online. 2024 Feb 3;23(1):14. doi: 10.1186/s12938-024-01212-4.
6
TransU²-Net: An Effective Medical Image Segmentation Framework Based on Transformer and U²-Net.TransU²-Net:一种基于 Transformer 和 U²-Net 的有效医学图像分割框架。
IEEE J Transl Eng Health Med. 2023 Jun 27;11:441-450. doi: 10.1109/JTEHM.2023.3289990. eCollection 2023.
7
Automated multi-modal Transformer network (AMTNet) for 3D medical images segmentation.用于3D医学图像分割的自动多模态Transformer网络(AMTNet)。
Phys Med Biol. 2023 Jan 9;68(2). doi: 10.1088/1361-6560/aca74c.
8
Hybrid dilation and attention residual U-Net for medical image segmentation.混合扩张和注意力残差 U-Net 用于医学图像分割。
Comput Biol Med. 2021 Jul;134:104449. doi: 10.1016/j.compbiomed.2021.104449. Epub 2021 May 11.
9
iU-Net: a hybrid structured network with a novel feature fusion approach for medical image segmentation.iU-Net:一种具有用于医学图像分割的新型特征融合方法的混合结构网络。
BioData Min. 2023 Feb 21;16(1):5. doi: 10.1186/s13040-023-00320-6.
10
RSU-Net: U-net based on residual and self-attention mechanism in the segmentation of cardiac magnetic resonance images.RSU-Net:基于残差和自注意力机制的 U-net 在心脏磁共振图像分割中的应用。
Comput Methods Programs Biomed. 2023 Apr;231:107437. doi: 10.1016/j.cmpb.2023.107437. Epub 2023 Feb 21.

引用本文的文献

1
Hybrid Deep Learning Framework for High-Accuracy Classification of Morphologically Similar Puffball Species Using CNN and Transformer Architectures.使用卷积神经网络(CNN)和Transformer架构的混合深度学习框架,用于对形态相似的马勃菌物种进行高精度分类。
Biology (Basel). 2025 Jul 5;14(7):816. doi: 10.3390/biology14070816.
2
Binary semantic segmentation for detection of prostate adenocarcinoma using an ensemble with attention and residual U-Net architectures.使用注意力机制和残差U-Net架构的集成方法进行前列腺腺癌检测的二元语义分割。
PeerJ Comput Sci. 2023 Dec 20;9:e1767. doi: 10.7717/peerj-cs.1767. eCollection 2023.

本文引用的文献

1
The Liver Tumor Segmentation Benchmark (LiTS).肝脏肿瘤分割基准(LiTS)。
Med Image Anal. 2023 Feb;84:102680. doi: 10.1016/j.media.2022.102680. Epub 2022 Nov 17.
2
Fast and Low-GPU-memory abdomen CT organ segmentation: The FLARE challenge.快速且低 GPU 内存的腹部 CT 器官分割:FLARE 挑战赛。
Med Image Anal. 2022 Nov;82:102616. doi: 10.1016/j.media.2022.102616. Epub 2022 Sep 13.
3
Optimizing the Deep Neural Networks by Layer-Wise Refined Pruning and the Acceleration on FPGA.通过逐层细化剪枝和在 FPGA 上的加速来优化深度神经网络。
Comput Intell Neurosci. 2022 Jun 1;2022:8039281. doi: 10.1155/2022/8039281. eCollection 2022.
4
3D Neural Networks for Visceral and Subcutaneous Adipose Tissue Segmentation using Volumetric Multi-Contrast MRI.使用容积多对比度 MRI 进行内脏和皮下脂肪组织分割的 3D 神经网络。
Annu Int Conf IEEE Eng Med Biol Soc. 2021 Nov;2021:3933-3937. doi: 10.1109/EMBC46164.2021.9630110.
5
AbdomenCT-1K: Is Abdominal Organ Segmentation a Solved Problem?腹部 CT-1K:腹部器官分割是否已经解决?
IEEE Trans Pattern Anal Mach Intell. 2022 Oct;44(10):6695-6714. doi: 10.1109/TPAMI.2021.3100536. Epub 2022 Sep 14.
6
Toward data-efficient learning: A benchmark for COVID-19 CT lung and infection segmentation.迈向数据高效学习:COVID-19 CT 肺和感染分割的基准。
Med Phys. 2021 Mar;48(3):1197-1210. doi: 10.1002/mp.14676. Epub 2021 Feb 6.
7
The state of the art in kidney and kidney tumor segmentation in contrast-enhanced CT imaging: Results of the KiTS19 challenge.对比增强CT成像中肾脏及肾肿瘤分割的技术现状:KiTS19挑战赛结果
Med Image Anal. 2021 Jan;67:101821. doi: 10.1016/j.media.2020.101821. Epub 2020 Oct 2.
8
UNet++: Redesigning Skip Connections to Exploit Multiscale Features in Image Segmentation.UNet++:重新设计跳过连接以利用图像分割中的多尺度特征。
IEEE Trans Med Imaging. 2020 Jun;39(6):1856-1867. doi: 10.1109/TMI.2019.2959609. Epub 2019 Dec 13.
9
Fully Dense UNet for 2-D Sparse Photoacoustic Tomography Artifact Removal.二维稀疏光声断层成像伪影去除的全密集 UNet。
IEEE J Biomed Health Inform. 2020 Feb;24(2):568-576. doi: 10.1109/JBHI.2019.2912935. Epub 2019 Apr 23.
10
Integrating Natural Language Processing and Machine Learning Algorithms to Categorize Oncologic Response in Radiology Reports.将自然语言处理和机器学习算法集成到放射学报告中的肿瘤反应分类中。
J Digit Imaging. 2018 Apr;31(2):178-184. doi: 10.1007/s10278-017-0027-x.