AH4的基因组序列，AH4是从乳鼠中分离出的一种可降解乳寡糖的菌株。
Genome sequence of AH4, a milk oligosaccharide-degrading strain isolated from suckling rats.
作者信息
Yamamoto Yuji, Suzuki Yasunori, Tsukuda Reo, Asai Chikara, Ishizuka Masaki, Tsujikawa Yuji, Sakane Iwao, Osawa Ro, Mukai Takao
机构信息
Laboratory of Cellular Microbiology, School of Veterinary Medicine, Kitasato University, Aomori, Japan.
Laboratory of Animal Hygiene, School of Veterinary Medicine, Kitasato University, Aomori, Japan.
出版信息
Microbiol Resour Announc. 2023 Oct 19;12(10):e0039523. doi: 10.1128/MRA.00395-23. Epub 2023 Sep 21.
Abstract
We had previously isolated AH4, a strain capable of degrading rat milk oligosaccharides. In this study, we determined the whole-genome sequence of AH4. This whole-genome information will expand our understanding of milk oligosaccharide-mediated symbioses between bacteria and host mammals.
摘要
我们之前分离出了AH4，这是一种能够降解大鼠乳寡糖的菌株。在本研究中，我们测定了AH4的全基因组序列。这些全基因组信息将拓展我们对细菌与宿主哺乳动物之间乳寡糖介导的共生关系的理解。
相似文献
1
Genome sequence of AH4, a milk oligosaccharide-degrading strain isolated from suckling rats.AH4的基因组序列，AH4是从乳鼠中分离出的一种可降解乳寡糖的菌株。
Microbiol Resour Announc. 2023 Oct 19;12(10):e0039523. doi: 10.1128/MRA.00395-23. Epub 2023 Sep 21.
2
Isolation and identification of milk oligosaccharide-degrading bacteria from the intestinal contents of suckling rats.从乳鼠肠道内容物中分离和鉴定降解乳寡糖的细菌。
Biosci Microbiota Food Health. 2021;40(1):27-32. doi: 10.12938/bmfh.2020-024. Epub 2020 Aug 8.
3
Milk oligosaccharide-mediated cross-feeding between and lactobacilli in the gut microbiota of infant rats.乳寡糖介导的新生大鼠肠道微生物群中双歧杆菌与乳酸杆菌之间的互养作用
Biosci Microbiota Food Health. 2021;40(4):204-211. doi: 10.12938/bmfh.2021-036. Epub 2021 Aug 11.
4
Whole genome sequencing data of a clinical strain EGR748 from Sabah, Malaysia.来自马来西亚沙巴州的临床菌株EGR748的全基因组测序数据。
Data Brief. 2020 Oct 2;33:106370. doi: 10.1016/j.dib.2020.106370. eCollection 2020 Dec.
5
Whole genome sequence of Enterococcus gallinarum EG81, a porcine strain harbouring the oxazolidinone-phenicol resistance gene optrA with chromosomal and plasmid location.鸡肠球菌 EG81 的全基因组序列，该菌株是一株具有染色体和质粒定位的噁唑烷酮-氯霉素耐药基因 optrA 的猪源菌株。
J Glob Antimicrob Resist. 2020 Sep;22:598-600. doi: 10.1016/j.jgar.2020.06.012. Epub 2020 Jun 27.
6
Enzymatic Synthesis of 6'-Sialyllactose, a Dominant Sialylated Human Milk Oligosaccharide, by a Novel -α-Sialidase from Bacteroides fragilis NCTC9343.β-岩藻糖苷酶突变体的构建及其在唾液酸化乳糖合成中的应用
Appl Environ Microbiol. 2018 Jun 18;84(13). doi: 10.1128/AEM.00071-18. Print 2018 Jul 1.
7
Whole-Genome Sequence of a Clinical Enterococcus gallinarum Strain in a Positive Hemoculture from Siriraj Hospital, Thailand.泰国诗里拉吉医院一份血培养阳性的鸡肠球菌临床菌株的全基因组序列
Microbiol Resour Announc. 2022 Dec 15;11(12):e0060522. doi: 10.1128/mra.00605-22. Epub 2022 Nov 1.
8
Do the binding properties of oligosaccharides in milk protect human infants from gastrointestinal bacteria?牛奶中寡糖的结合特性是否能保护人类婴儿免受胃肠道细菌侵害？
J Nutr. 1997 May;127(5 Suppl):980S-984S. doi: 10.1093/jn/127.5.980S.
9
Functional in vitro screening of probiotic strains for inoculation of piglets as a prophylactic measure towards Enterotoxigenic Escherichia coli infection.益生菌菌株的体外功能筛选，作为预防仔猪肠毒素性大肠杆菌感染的接种措施。
J Microbiol Methods. 2021 Jan;180:106126. doi: 10.1016/j.mimet.2020.106126. Epub 2020 Dec 14.
10
High-throughput glycomic analyses reveal unique oligosaccharide profiles of canine and feline milk samples.高通量糖组学分析揭示了犬和猫乳样本独特的寡糖图谱。
PLoS One. 2020 Dec 3;15(12):e0243323. doi: 10.1371/journal.pone.0243323. eCollection 2020.
本文引用的文献
1
Milk oligosaccharide-mediated cross-feeding between and lactobacilli in the gut microbiota of infant rats.乳寡糖介导的新生大鼠肠道微生物群中双歧杆菌与乳酸杆菌之间的互养作用
Biosci Microbiota Food Health. 2021;40(4):204-211. doi: 10.12938/bmfh.2021-036. Epub 2021 Aug 11.
2
Isolation and identification of milk oligosaccharide-degrading bacteria from the intestinal contents of suckling rats.从乳鼠肠道内容物中分离和鉴定降解乳寡糖的细菌。
Biosci Microbiota Food Health. 2021;40(1):27-32. doi: 10.12938/bmfh.2020-024. Epub 2020 Aug 8.
3
Varied Pathways of Infant Gut-Associated to Assimilate Human Milk Oligosaccharides: Prevalence of the Gene Set and Its Correlation with Bifidobacteria-Rich Microbiota Formation.婴儿肠道相关途径同化人乳寡糖的多样性：基因集的流行及其与富含双歧杆菌的微生物群落形成的相关性。
Nutrients. 2019 Dec 26;12(1):71. doi: 10.3390/nu12010071.
4
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.DFAST：一个灵活的原核生物基因组注释管道，用于更快地发布基因组。
Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
5
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器：从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
6
Isolation of High-Molecular-Weight DNA Using Organic Solvents.使用有机溶剂分离高分子量DNA
Cold Spring Harb Protoc. 2017 Apr 3;2017(4):pdb.prot093450. doi: 10.1101/pdb.prot093450.
Zotero 插件