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用于CRISPR研究的抗SpCas9 IgY多克隆抗体的制备

Anti-SpCas9 IgY Polyclonal Antibodies Production for CRISPR Research Use.

作者信息

León Esteban, Ortiz Valentina, Pérez Alexander, Téllez Jair, Díaz Gonzalo J, Ramírez H María H, Contreras R Luis E

机构信息

Facultad de Ciencias, Universidad Nacional de Colombia, 111311 Bogotá, Colombia.

Escuela de Pregrado, Dirección Académica, Universidad Nacional de Colombia, 202017 sede La Paz, Colombia.

出版信息

ACS Omega. 2023 Sep 6;8(37):33809-33818. doi: 10.1021/acsomega.3c04273. eCollection 2023 Sep 19.

Abstract

The CRISPR/Cas adaptative immune system has been harnessed as an RNA-guided, programmable genome editing tool, allowing for diverse biotechnological applications. The implementation of the system relies on the ability to detect the Cas9 protein in biological samples. This task is facilitated by employing antibodies, which exhibit several advantageous features and applications in the context of tropical neglected diseases. This study reports a one-month immunization scheme with the Cas9 protein from to produce IgY polyclonal antibodies (anti-SpCas9), which can be rapidly isolated by combining yolk de-lipidation with protein salting out using pectin and ammonium sulfate, respectively. Immunodetection assays indicate that the antibodies are highly sensitive, specific, and useful for detecting the SpCas9 protein in promastigotes ofexpressing exogenous SpCas9. Thus, the simple method for producing anti-SpCas9 IgY antibodies will accelerate CRISPR/Cas-based studies in spp. This approach serves as a valuable research tool in this parasite model and holds the potential for wide application in various other biological samples, promoting the implementation of the system. In fact, a bioinformatics approach based on the identification of antigenic determinants in the SpCas9 protein suggests the possibility of using the anti-SpCas9 IgY antibodies in applications such as Prime and Base editing.

摘要

CRISPR/Cas适应性免疫系统已被用作一种RNA引导的、可编程的基因组编辑工具,可用于多种生物技术应用。该系统的实施依赖于在生物样品中检测Cas9蛋白的能力。通过使用抗体可促进这项任务,这些抗体在热带被忽视疾病的背景下具有若干优势特性和应用。本研究报告了一种用来自的Cas9蛋白进行为期一个月的免疫方案,以产生IgY多克隆抗体(抗SpCas9),可分别通过将蛋黄脱脂与使用果胶和硫酸铵进行蛋白质盐析相结合来快速分离该抗体。免疫检测分析表明,这些抗体高度敏感、特异,可用于检测表达外源SpCas9的前鞭毛体中的SpCas9蛋白。因此,生产抗SpCas9 IgY抗体的简单方法将加速基于CRISPR/Cas的在种中的研究。这种方法在该寄生虫模型中是一种有价值的研究工具,并且在各种其他生物样品中具有广泛应用的潜力,可促进该系统的实施。事实上,基于鉴定SpCas9蛋白中抗原决定簇的生物信息学方法表明,抗SpCas9 IgY抗体有可能用于如碱基编辑和引导编辑等应用中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/10515394/ae0d461c60e5/ao3c04273_0002.jpg

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