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家畜与野生动物界面的数学建模:物种间疾病传播驱动因素的综述

Mathematical modeling at the livestock-wildlife interface: scoping review of drivers of disease transmission between species.

作者信息

Hayes Brandon H, Vergne Timothée, Andraud Mathieu, Rose Nicolas

机构信息

IHAP, Université de Toulouse, INRAE, ENVT, Toulouse, France.

Ploufragan-Plouzané-Niort Laboratory, The French Agency for Food, Agriculture and the Environment (ANSES), Ploufragan, France.

出版信息

Front Vet Sci. 2023 Sep 6;10:1225446. doi: 10.3389/fvets.2023.1225446. eCollection 2023.

Abstract

Modeling of infectious diseases at the livestock-wildlife interface is a unique subset of mathematical modeling with many innate challenges. To ascertain the characteristics of the models used in these scenarios, a scoping review of the scientific literature was conducted. Fifty-six studies qualified for inclusion. Only 14 diseases at this interface have benefited from the utility of mathematical modeling, despite a far greater number of shared diseases. The most represented species combinations were cattle and badgers (for bovine tuberculosis, 14), and pigs and wild boar [for African (8) and classical (3) swine fever, and foot-and-mouth and disease (1)]. Assessing control strategies was the overwhelming primary research objective (27), with most studies examining control strategies applied to wildlife hosts and the effect on domestic hosts (10) or both wild and domestic hosts (5). In spatially-explicit models, while livestock species can often be represented through explicit and identifiable location data (such as farm, herd, or pasture locations), wildlife locations are often inferred using habitat suitability as a proxy. Though there are innate assumptions that may not be fully accurate when using habitat suitability to represent wildlife presence, especially for wildlife the parsimony principle plays a large role in modeling diseases at this interface, where parameters are difficult to document or require a high level of data for inference. Explaining observed transmission dynamics was another common model objective, though the relative contribution of involved species to epizootic propagation was only ascertained in a few models. More direct evidence of disease spill-over, as can be obtained through genomic approaches based on pathogen sequences, could be a useful complement to further inform such modeling. As computational and programmatic capabilities advance, the resolution of the models and data used in these models will likely be able to increase as well, with a potential goal being the linking of modern complex ecological models with the depth of dynamics responsible for pathogen transmission. Controlling diseases at this interface is a critical step toward improving both livestock and wildlife health, and mechanistic models are becoming increasingly used to explore the strategies needed to confront these diseases.

摘要

家畜 - 野生动物界面的传染病建模是数学建模中的一个独特子集,存在许多固有挑战。为了确定在这些情况下使用的模型的特征,我们对科学文献进行了范围综述。有56项研究符合纳入标准。尽管共享疾病的数量要多得多,但在这个界面上只有14种疾病受益于数学建模的应用。最具代表性的物种组合是牛和獾(针对牛结核病,有14项研究),以及猪和野猪(针对非洲猪瘟(8项)、经典猪瘟(3项)、口蹄疫(1项))。评估控制策略是压倒性的主要研究目标(27项),大多数研究考察了应用于野生动物宿主的控制策略及其对家畜宿主的影响(10项)或对野生动物和家畜宿主两者的影响(5项)。在空间明确的模型中,虽然家畜物种通常可以通过明确且可识别的位置数据(如农场、畜群或牧场位置)来表示,但野生动物的位置通常使用栖息地适宜性作为代理进行推断。尽管在使用栖息地适宜性来表示野生动物存在时可能存在一些不完全准确的固有假设,特别是对于野生动物而言,但简约原则在这个界面的疾病建模中起着很大作用,因为在此处参数难以记录或需要高水平的数据进行推断。解释观察到的传播动态是另一个常见的模型目标,不过只有少数模型确定了所涉及物种对动物流行病传播的相对贡献。通过基于病原体序列的基因组方法可以获得的更直接的疾病溢出证据,可能是进一步为这种建模提供信息的有用补充。随着计算和编程能力的提高,这些模型中使用的模型和数据的分辨率可能也会提高,一个潜在目标是将现代复杂生态模型与负责病原体传播的动态深度联系起来。控制这个界面的疾病是改善家畜和野生动物健康的关键一步,机理模型正越来越多地用于探索应对这些疾病所需的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ad6/10511766/d5ede474c2c5/fvets-10-1225446-g001.jpg

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