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细胞外囊泡蛋白质组对周围环境的适应性:揭示其感染过程的新工具

The Adaptation of Extracellular Vesicles Proteome to Surrounding Conditions: Revealing New Tools for Its Infection Process.

作者信息

Escobar-Niño Almudena, Harzen Anne, Stolze Sara C, Nakagami Hirofumi, Fernández-Acero Francisco J

机构信息

Microbiology Laboratory, Institute for Viticulture and Agri-Food Research (IVAGRO), Faculty of Environmental and Marine Sciences, Department of Biomedicine, Biotechnology and Public Health, University of Cádiz, 11510 Puerto Real, Spain.

Protein Mass Spectrometry, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany.

出版信息

J Fungi (Basel). 2023 Aug 24;9(9):872. doi: 10.3390/jof9090872.

Abstract

Extracellular vesicles (EVs) are membranous particles released by different organisms. EVs carry several sets of macromolecules implicated in cell communication. EVs have become a relevant topic in the study of pathogenic fungi due to their relationship with fungal-host interactions. One of the essential research areas in this field is the characterization protein profile of EVs since plant fungal pathogens rely heavily on secreted proteins to invade their hosts. However, EVs of are little known, which is one of the most devastating phytopathogenic fungi. The present study has two main objectives: the characterization of EVs proteome changes under two pathogenic conditions and the description of their potential role during the infective process. All the experimental procedure was conducted in growing in a minimal salt medium supplemented with glucose as a constitutive stage and deproteinized tomato cell walls (TCW) as a virulence inductor. The isolation of EVs was performed by differential centrifugation, filtration, ultrafiltration, and sucrose cushion ultracentrifugation. EVs fractions were visualised by TEM using negative staining. Proteomic analysis of EVs cargo was addressed by LC-MS/MS. The methodology used allowed the correct isolation of EVs and the identification of a high number of EV proteins, including potential EV markers. The isolated EVs displayed differences in morphology under both assayed conditions. GO analysis of EV proteins showed enrichment in cell wall metabolism and proteolysis under TCW. KEGG analysis also showed the difference in EVs function under both conditions, highlighting the presence of potential virulence/pathogenic factors implicated in cell wall metabolism, among others. This work describes the first evidence of EVs protein cargo adaptation in , which seems to play an essential role in its infection process, sharing crucial functions with the conventional secretion pathways.

摘要

细胞外囊泡(EVs)是由不同生物体释放的膜性颗粒。EVs携带多组参与细胞通讯的大分子。由于EVs与真菌 - 宿主相互作用的关系,它们已成为致病真菌研究中的一个相关主题。该领域的重要研究方向之一是EVs蛋白质谱的表征,因为植物真菌病原体严重依赖分泌蛋白来侵染宿主。然而,对于[某种真菌名称未给出]这种最具破坏性的植物病原真菌之一的EVs却知之甚少。本研究有两个主要目标:表征[真菌名称未给出]在两种致病条件下EVs蛋白质组的变化,以及描述它们在感染过程中的潜在作用。所有实验过程均在以添加葡萄糖作为组成阶段和脱蛋白番茄细胞壁(TCW)作为毒力诱导剂的基本盐培养基中生长的[真菌名称未给出]上进行。EVs的分离通过差速离心、过滤、超滤和蔗糖垫层超速离心进行。使用负染色通过透射电子显微镜(TEM)观察EVs组分。通过液相色谱 - 串联质谱(LC - MS/MS)对EVs的货物进行蛋白质组学分析。所使用的方法能够正确分离[真菌名称未给出]的EVs并鉴定出大量的EV蛋白,包括潜在的EV标志物。在两种测定条件下,分离出的EVs在形态上表现出差异。对EV蛋白的基因本体(GO)分析显示在TCW条件下细胞壁代谢和蛋白水解过程中富集。京都基因与基因组百科全书(KEGG)分析也显示了两种条件下EVs功能的差异,突出了细胞壁代谢等过程中潜在的毒力/致病因子的存在。这项工作描述了[真菌名称未给出]中EVs蛋白质货物适应性的首个证据,这似乎在其感染过程中起着至关重要的作用,与传统分泌途径共享关键功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e36f/10532283/cd88ad09ff5d/jof-09-00872-g001.jpg

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