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通过均匀设计和新型深海菌株13的全基因组测序分离及优化黄曲霉毒素B降解

Isolation and Optimization of Aflatoxin B Degradation by Uniform Design and Complete Genome Sequencing of Novel Deep-Sea Strain 13.

作者信息

Wang Jingying, Chen Qiqi, Yan Peisheng, Dong Chunming, Shao Zongze

机构信息

School of Environment, Harbin Institute of Technology, Harbin 150090, China.

School of Marine Science and Technology, Harbin Institute of Technology (Weihai), Weihai 264209, China.

出版信息

Toxins (Basel). 2023 Aug 24;15(9):520. doi: 10.3390/toxins15090520.

Abstract

Aflatoxin B is a natural carcinogenic mycotoxin. The biological detoxification of aflatoxin could result in less environmental pollution, more moderate conditions, and less impact on food and feed, and be more convenient than physical and chemical methods. In this study, strain 13 with aflatoxin B degradation activity (67.47 ± 1.44%) was isolated and identified as . A uniform design was applied to optimize the degradation activity using a software Data Processing System, and a quadratic polynomial stepwise regression model was selected to investigate the relationships between the degradation rate and five independent variables. Furthermore, the optimal degradation conditions (culture temperature of 30 °C, culture time of 4.2 days, seawater ratio of 100%, pH of 7.11, and inoculation dosage of 0.09%) were verified with a degradation rate of 88 ± 0.03%, which was well matched with the predicted value (92.97%) of the model. Complete genome sequencing of , conducted with a combination of Illumina and single-molecule real-time sequencing, was used to analyze the genomic features and functions of the strain, which were predicted by the annotation based on seven databases, and may provide insights into the potential of , as well as providing a reference for degradation gene and protein mining. These results indicate that strain 13 has the ability to degrade aflatoxin B efficiently, and it also has the potential to provide aflatoxin-degrading enzymes.

摘要

黄曲霉毒素B是一种天然致癌性霉菌毒素。黄曲霉毒素的生物解毒可减少环境污染,条件更为温和,对食品和饲料的影响更小,并且比物理和化学方法更便捷。在本研究中,分离出具有黄曲霉毒素B降解活性(67.47±1.44%)的菌株13,并将其鉴定为 。应用均匀设计,使用软件数据处理系统优化降解活性,并选择二次多项式逐步回归模型研究降解率与五个自变量之间的关系。此外,验证了最佳降解条件(培养温度30℃、培养时间4.2天、海水比例100%、pH值7.11、接种量0.09%),降解率为88±0.03%,与模型预测值(92.97%)匹配良好。结合Illumina和单分子实时测序对 进行全基因组测序,用于分析该菌株的基因组特征和功能,这些特征和功能通过基于七个数据库的注释进行预测,可能为 的潜力提供见解,并为降解基因和蛋白质挖掘提供参考。这些结果表明,菌株13具有高效降解黄曲霉毒素B的能力,并且还具有提供黄曲霉毒素降解酶的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a498/10534749/70b4f18c4e8f/toxins-15-00520-g001.jpg

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