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基于表型的全基因组关联研究鉴定到与中国汉族人群早发性缺血性脑卒中相关的新风险基因

Epigenome-Wide Meta-analysis Reveals Associations Between Dietary Glycemic Index and Glycemic Load and DNA Methylation in Children and Adolescents of Different Body Sizes.

机构信息

Institute of Diabetes Research, Helmholtz Munich, German Research Center for Environmental Health, Munich, Germany.

Forschergruppe Diabetes e.V. at Helmholtz Munich, German Research Center for Environmental Health, Munich, Germany.

出版信息

Diabetes Care. 2023 Nov 1;46(11):2067-2075. doi: 10.2337/dc23-0474.

Abstract

OBJECTIVE

Dietary glycemic index (GI) and glycemic load (GL) are associated with cardiometabolic health in children and adolescents, with potential distinct effects in people with increased BMI. DNA methylation (DNAm) may mediate these effects. Thus, we conducted meta-analyses of epigenome-wide association studies (EWAS) between dietary GI and GL and blood DNAm of children and adolescents.

RESEARCH DESIGN AND METHODS

We calculated dietary GI and GL and performed EWAS in children and adolescents (age range: 4.5-17 years) from six cohorts (N = 1,187). We performed stratified analyses of participants with normal weight (n = 801) or overweight or obesity (n = 386). We performed look-ups for the identified cytosine-phosphate-guanine (CpG) sites (false discovery rate [FDR] <0.05) with tissue-specific gene expression of 832 blood and 223 subcutaneous adipose tissue samples from children and adolescents.

RESULTS

Dietary GL was positively associated with DNAm of cg20274553 (FDR <0.05), annotated to WDR27. Several CpGs were identified in the normal-weight (GI: 85; GL: 17) and overweight or obese (GI: 136; GL: 298; FDR <0.05) strata, and none overlapped between strata. In participants with overweight or obesity, identified CpGs were related to RNA expression of genes associated with impaired metabolism (e.g., FRAT1, CSF3).

CONCLUSIONS

We identified 537 associations between dietary GI and GL and blood DNAm, mainly in children and adolescents with overweight or obesity. High-GI and/or -GL diets may influence epigenetic gene regulation and thereby promote metabolic derangements in young people with increased BMI.

摘要

目的

饮食血糖指数(GI)和血糖负荷(GL)与儿童和青少年的心脏代谢健康有关,对于 BMI 增加的人群,其潜在影响可能不同。DNA 甲基化(DNAm)可能介导这些影响。因此,我们对儿童和青少年饮食 GI 和 GL 与血液 DNAm 之间的全基因组关联研究(EWAS)进行了荟萃分析。

研究设计和方法

我们计算了饮食 GI 和 GL,并在来自六个队列的儿童和青少年(年龄范围:4.5-17 岁)中进行了 EWAS(N=1187)。我们对体重正常(n=801)或超重或肥胖(n=386)的参与者进行了分层分析。我们对鉴定的胞嘧啶-磷酸-鸟嘌呤(CpG)位点(错误发现率[FDR] <0.05)进行了查找,这些位点与儿童和青少年 832 个血液和 223 个皮下脂肪组织样本的组织特异性基因表达有关。

结果

饮食 GL 与 cg20274553 的 DNAm 呈正相关(FDR <0.05),该基因注释为 WDR27。在体重正常(GI:85;GL:17)和超重或肥胖(GI:136;GL:298;FDR <0.05)组中鉴定出了多个 CpG,且两组之间没有重叠。在超重或肥胖的参与者中,鉴定出的 CpG 与与代谢受损相关的基因的 RNA 表达有关(例如,FRAT1,CSF3)。

结论

我们发现饮食 GI 和 GL 与血液 DNAm 之间存在 537 种关联,主要存在于超重或肥胖的儿童和青少年中。高 GI 和/或高 GL 饮食可能会影响表观遗传基因调控,从而促进 BMI 增加的年轻人代谢紊乱。

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