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定位栽培花生(Arachis hypogaea L.)重组自交系群体在七种环境下百荚重和百粒重的数量性状基因座(QTLs)

Mapping Quantitative Trait Loci (QTLs) for Hundred-Pod and Hundred-Seed Weight under Seven Environments in a Recombinant Inbred Line Population of Cultivated Peanut ( L.).

机构信息

State Key Laboratory of North China for Crop Improvement and Regulation, North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Key Laboratory of Crop Germplasm Resources of Hebei Province, Hebei Agricultural University, Baoding 071001, China.

Department of Crop, Soil and Environmental Sciences, Auburn University, Auburn, AL 36849, USA.

出版信息

Genes (Basel). 2023 Sep 13;14(9):1792. doi: 10.3390/genes14091792.

Abstract

The cultivated peanut ( L.) is a significant oil and cash crop globally. Hundred-pod and -seed weight are important components for peanut yield. To unravel the genetic basis of hundred-pod weight (HPW) and hundred-seed weight (HSW), in the current study, a recombinant inbred line (RIL) population with 188 individuals was developed from a cross between JH5 (JH5, large pod and seed weight) and M130 (small pod and seed weight), and was utilized to identify QTLs for HPW and HSW. An integrated genetic linkage map was constructed by using SSR, AhTE, SRAP, TRAP and SNP markers. This map consisted of 3130 genetic markers, which were assigned to 20 chromosomes, and covered 1998.95 cM with an average distance 0.64 cM. On this basis, 31 QTLs for HPW and HSW were located on seven chromosomes, with each QTL accounting for 3.7-10.8% of phenotypic variance explained (PVE). Among these, seven QTLs were detected under multiple environments, and two major QTLs were found on B04 and B08. Notably, a QTL hotspot on chromosome A08 contained seven QTLs over a 2.74 cM genetic interval with an 0.36 Mb physical map, including 18 candidate genes. Of these, , , , and might play a role in modulating peanut pod and seed weight. These findings could facilitate further research into the genetic mechanisms influencing pod and seed weight in cultivated peanut.

摘要

培育的花生(Arachis hypogaea L.)是全球重要的油料和经济作物。百果重和百仁重是衡量花生产量的重要组成部分。为了揭示百果重(HPW)和百仁重(HSW)的遗传基础,本研究利用 JH5(JH5,大荚果和种子重量)和 M130(小荚果和种子重量)杂交产生的 188 个个体的重组自交系(RIL)群体,鉴定了 HPW 和 HSW 的 QTL。通过使用 SSR、AhTE、SRAP、TRAP 和 SNP 标记构建了一个综合遗传连锁图谱。该图谱由 3130 个遗传标记组成,分配到 20 条染色体上,覆盖 1998.95cM,平均距离为 0.64cM。在此基础上,在七个染色体上定位到 31 个 HPW 和 HSW 的 QTL,每个 QTL 解释表型变异的 3.7-10.8%。其中,七个 QTL 在多个环境下被检测到,两个主要 QTL 位于 B04 和 B08 上。值得注意的是,A08 染色体上的一个 QTL 热点包含七个 QTL,跨越 2.74cM 的遗传区间,包含 18 个候选基因。其中, 、 、 、 和 可能在调节花生荚果和种子重量方面发挥作用。这些发现有助于进一步研究影响栽培花生荚果和种子重量的遗传机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a95/10531390/a2fe9fc1f9e0/genes-14-01792-g001.jpg

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