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IEEE Trans Neural Netw Learn Syst. 2024 Sep;35(9):12784-12795. doi: 10.1109/TNNLS.2023.3264735. Epub 2024 Sep 3.
2
Temporal Annotation in the Clinical Domain.临床领域中的时间标注
Trans Assoc Comput Linguist. 2014 Apr;2:143-154.
3
Annotating temporal information in clinical narratives.标注临床叙述中的时间信息。
J Biomed Inform. 2013 Dec;46 Suppl(0):S5-S12. doi: 10.1016/j.jbi.2013.07.004. Epub 2013 Jul 19.
4
Evaluating temporal relations in clinical text: 2012 i2b2 Challenge.评估临床文本中的时间关系:2012 i2b2 挑战赛。
J Am Med Inform Assoc. 2013 Sep-Oct;20(5):806-13. doi: 10.1136/amiajnl-2013-001628. Epub 2013 Apr 5.

基于多头注意力机制的端到端临床时间信息提取

End-to-end clinical temporal information extraction with multi-head attention.

作者信息

Miller Timothy, Bethard Steven, Dligach Dmitriy, Savova Guergana

机构信息

Computational Health Informatics Program, Boston Children's Hospital, Harvard Medical School.

School of Information, University of Arizona.

出版信息

Proc Conf Assoc Comput Linguist Meet. 2023 Jul;2023:313-319.

PMID:37780680
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10540151/
Abstract

Understanding temporal relationships in text from electronic health records can be valuable for many important downstream clinical applications. Since Clinical TempEval 2017, there has been little work on end-to-end systems for temporal relation extraction, with most work focused on the setting where gold standard events and time expressions are given. In this work, we make use of a novel multi-headed attention mechanism on top of a pre-trained transformer encoder to allow the learning process to attend to multiple aspects of the contextualized embeddings. Our system achieves state of the art results on the THYME corpus by a wide margin, in both the in-domain and cross-domain settings.

摘要

理解电子健康记录文本中的时间关系对于许多重要的下游临床应用具有重要价值。自2017年临床时间评估(Clinical TempEval)以来,针对时间关系提取的端到端系统的研究工作较少,大多数工作集中在给定金标准事件和时间表达式的情况下。在这项工作中,我们在预训练的Transformer编码器之上使用了一种新颖的多头注意力机制,以使学习过程能够关注上下文嵌入的多个方面。我们的系统在THYME语料库的领域内和跨领域设置中均大幅领先,取得了最优的结果。