• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

球形折叠蛋白小分子泛素样修饰物 1(SUMO1)的相分离和聚集。

Phase Separation and Aggregation of a Globular Folded Protein Small Ubiquitin-like Modifier 1 (SUMO1).

机构信息

Department of Chemical Sciences, Tata Institute of Fundamental Research, Dr. Homi Bhabha Road, Colaba, Mumbai 400005, India.

出版信息

J Phys Chem Lett. 2023 Oct 12;14(40):9060-9068. doi: 10.1021/acs.jpclett.3c02092. Epub 2023 Oct 2.

DOI:10.1021/acs.jpclett.3c02092
PMID:37782899
Abstract

Liquid-liquid phase separation (LLPS) plays a crucial role in cellular organization, primarily driven by intrinsically disordered proteins (IDPs) leading to the formation of biomolecular condensates. A folded protein SUMO that post-translationally modifies cellular proteins has recently emerged as a regulator of LLPS. Given its compact structure and limited flexibility, the precise role of SUMO in condensate formation remains to be investigated. Here, we show the rapid phase separation of SUMO1 into micrometer-sized liquid-like condensates in inert crowders under physiological conditions. Subsequent time-dependent conformational changes and aggregation are probed by label-free methods (tryptophan fluorescence and Raman spectroscopy). Remarkably, experiments on a SUMO1 variant lacking the N-terminal disordered region further corroborate the role of its structured part in phase transitions. Our findings highlight the potential of folded proteins to engage in LLPS and emphasize further investigation into the influence of the SUMO tag on IDPs associated with membrane-less assemblies in cells.

摘要

液-液相分离(LLPS)在细胞组织中起着至关重要的作用,主要由内在无序蛋白质(IDPs)驱动,导致生物分子凝聚物的形成。一种折叠的蛋白质 SUMO,它可以对细胞蛋白进行翻译后修饰,最近被发现是 LLPS 的调节剂。鉴于其紧凑的结构和有限的灵活性,SUMO 在凝聚物形成中的精确作用仍有待研究。在这里,我们在生理条件下的惰性拥挤物中显示 SUMO1 迅速分离成微米级的液态凝聚物。通过无标记方法(色氨酸荧光和拉曼光谱)探测随后的时变构象变化和聚集。值得注意的是,对缺乏 N 端无序区的 SUMO1 变体的实验进一步证实了其结构部分在相变中的作用。我们的发现强调了折叠蛋白质参与 LLPS 的潜力,并强调进一步研究 SUMO 标签对与无膜组装相关的 IDPs 的影响。

相似文献

1
Phase Separation and Aggregation of a Globular Folded Protein Small Ubiquitin-like Modifier 1 (SUMO1).球形折叠蛋白小分子泛素样修饰物 1(SUMO1)的相分离和聚集。
J Phys Chem Lett. 2023 Oct 12;14(40):9060-9068. doi: 10.1021/acs.jpclett.3c02092. Epub 2023 Oct 2.
2
Unravelling the microscopic characteristics of intrinsically disordered proteins upon liquid-liquid phase separation.解析液-液相分离过程中无规卷曲蛋白的微观特征。
Essays Biochem. 2022 Dec 16;66(7):891-900. doi: 10.1042/EBC20220148.
3
Previously uncharacterized interactions between the folded and intrinsically disordered domains impart asymmetric effects on UBQLN2 phase separation.以前未被描述的折叠和固有无序结构域之间的相互作用对 UBQLN2 相分离产生了不对称的影响。
Protein Sci. 2021 Jul;30(7):1467-1481. doi: 10.1002/pro.4128. Epub 2021 Jun 5.
4
In-Silico Analysis of pH-Dependent Liquid-Liquid Phase Separation in Intrinsically Disordered Proteins.基于无序蛋白质的 pH 值依赖的液-液相分离的计算分析。
Biomolecules. 2022 Jul 12;12(7):974. doi: 10.3390/biom12070974.
5
The N-terminal domain of the prion protein is required and sufficient for liquid-liquid phase separation: A crucial role of the Aβ-binding domain.朊病毒蛋白的 N 端结构域对于液-液相分离是必需且充分的:Aβ 结合结构域的关键作用。
J Biol Chem. 2021 Jul;297(1):100860. doi: 10.1016/j.jbc.2021.100860. Epub 2021 Jun 6.
6
Liquid-Liquid Phase Separation by Intrinsically Disordered Protein Regions of Viruses: Roles in Viral Life Cycle and Control of Virus-Host Interactions.病毒无规则蛋白区域的液-液相分离:在病毒生命周期中的作用和对病毒-宿主相互作用的控制。
Int J Mol Sci. 2020 Nov 28;21(23):9045. doi: 10.3390/ijms21239045.
7
TAR DNA-binding protein 43 (TDP-43) liquid-liquid phase separation is mediated by just a few aromatic residues.TAR DNA 结合蛋白 43(TDP-43)的液-液相分离仅由几个芳香族残基介导。
J Biol Chem. 2018 Apr 20;293(16):6090-6098. doi: 10.1074/jbc.AC117.001037. Epub 2018 Mar 6.
8
Biological soft matter: intrinsically disordered proteins in liquid-liquid phase separation and biomolecular condensates.生物软物质:液-液相分离和生物分子凝聚物中的固有无序蛋白质。
Essays Biochem. 2022 Dec 16;66(7):831-847. doi: 10.1042/EBC20220052.
9
Comparative roles of charge, , and hydrophobic interactions in sequence-dependent phase separation of intrinsically disordered proteins.电荷、极性和疏水力在无序蛋白质序列依赖相分离中的比较作用。
Proc Natl Acad Sci U S A. 2020 Nov 17;117(46):28795-28805. doi: 10.1073/pnas.2008122117. Epub 2020 Nov 2.
10
Liquid-Liquid Phase Separation in Crowded Environments.拥挤环境中的液-液相分离。
Int J Mol Sci. 2020 Aug 17;21(16):5908. doi: 10.3390/ijms21165908.

引用本文的文献

1
Raman spectroscopy and imaging of protein droplet formation and aggregation.蛋白质液滴形成与聚集的拉曼光谱及成像
Curr Opin Struct Biol. 2025 Jun;92:103041. doi: 10.1016/j.sbi.2025.103041. Epub 2025 Apr 1.
2
COCOMO2: A Coarse-Grained Model for Interacting Folded and Disordered Proteins.COCOMO2:一种用于相互作用的折叠和无序蛋白质的粗粒度模型。
J Chem Theory Comput. 2025 Feb 25;21(4):2095-2107. doi: 10.1021/acs.jctc.4c01460. Epub 2025 Feb 5.
3
Structured protein domains enter the spotlight: modulators of biomolecular condensate form and function.
结构化蛋白质结构域成为焦点:生物分子凝聚体形成和功能的调节剂。
Trends Biochem Sci. 2025 Mar;50(3):206-223. doi: 10.1016/j.tibs.2024.12.008. Epub 2025 Jan 17.
4
COCOMO2: A coarse-grained model for interacting folded and disordered proteins.COCOMO2:一种用于相互作用的折叠蛋白和无序蛋白的粗粒度模型。
bioRxiv. 2024 Nov 1:2024.10.29.620916. doi: 10.1101/2024.10.29.620916.
5
The kinase NEK6 positively regulates LSD1 activity and accumulation in local chromatin sub-compartments.激酶 NEK6 正向调节 LSD1 在局部染色质亚区的活性和积累。
Commun Biol. 2024 Nov 10;7(1):1483. doi: 10.1038/s42003-024-07199-x.
6
Protein structure-function continuum model: Emerging nexuses between specificity, evolution, and structure.蛋白质结构-功能连续体模型:特异性、进化和结构之间的新兴联系。
Protein Sci. 2024 Apr;33(4):e4968. doi: 10.1002/pro.4968.