• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

KairoSight-3.0:一款经过验证的光学映射软件,用于表征心脏电生理学、兴奋-收缩偶联和交替变化。

KairoSight-3.0: A validated optical mapping software to characterize cardiac electrophysiology, excitation-contraction coupling, and alternans.

作者信息

Haq Kazi T, Roberts Anysja, Berk Fiona, Allen Samuel, Swift Luther M, Posnack Nikki Gillum

机构信息

Sheikh Zayed Institute for Pediatric Surgical Innovation, Children's National Health System, Washington, DC 20010, USA.

Children's National Heart Institute, Children's National Hospital, Washington, DC 20010, USA.

出版信息

J Mol Cell Cardiol Plus. 2023 Sep;5. doi: 10.1016/j.jmccpl.2023.100043. Epub 2023 Aug 18.

DOI:10.1016/j.jmccpl.2023.100043
PMID:37786807
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10544851/
Abstract

BACKGROUND

Cardiac optical mapping is an imaging technique that measures fluorescent signals across a cardiac preparation. Dual optical imaging of voltage-sensitive and calcium-sensitive probes allows for simultaneous recordings of cardiac action potentials and intracellular calcium transients with high spatiotemporal resolution. The analysis of these complex optical datasets is both time intensive and technically challenging; as such, we have developed a software package for semi-automated image processing and analysis. Herein, we report an updated version of our software package () with features to enhance the characterization of cardiac parameters using optical signals.

METHODS

To test software validity and applicability, we used Langendorff-perfused heart preparations to record transmembrane voltage and intracellular calcium signals from the epicardial surface. Isolated hearts from guinea pigs and rats were loaded with a potentiometric dye (RH237) and/or calcium indicator dye (Rhod-2AM) and fluorescent signals were acquired. We used Python 3.8.5 programming language to develop the software. Cardiac maps were validated with a user-specified manual mapping approach.

RESULTS

Manual maps of action potential duration (30 or 80 % repolarization), calcium transient duration (30 or 80 % reuptake), action potential and calcium transient alternans were constituted to validate the accuracy of software-generated maps. Manual and software maps had high accuracy, with >97 % of manual and software values falling within 10 ms of each other and >75 % within 5 ms for action potential duration and calcium transient duration measurements ( = 1000-2000 pixels). Further, our software package includes additional measurement tools to analyze signal-to-noise ratio, conduction velocity, action potential and calcium transient alternans, and action potential-calcium transient coupling time to produce physiologically meaningful optical maps.

CONCLUSIONS

has enhanced capabilities to perform measurements of cardiac electrophysiology, calcium handling, alternans, and the excitation-contraction coupling with satisfactory accuracy.

摘要

背景

心脏光学映射是一种测量心脏标本上荧光信号的成像技术。对电压敏感和钙敏感探针进行双光学成像,能够以高时空分辨率同时记录心脏动作电位和细胞内钙瞬变。对这些复杂的光学数据集进行分析既耗时又具有技术挑战性;因此,我们开发了一个用于半自动图像处理和分析的软件包。在此,我们报告了我们软件包的更新版本(),其具有利用光学信号增强心脏参数表征的功能。

方法

为了测试软件的有效性和适用性,我们使用Langendorff灌注心脏标本从心外膜表面记录跨膜电压和细胞内钙信号。给来自豚鼠和大鼠的离体心脏加载电位染料(RH237)和/或钙指示剂染料(Rhod - 2AM),并采集荧光信号。我们使用Python 3.8.5编程语言开发该软件。心脏图谱通过用户指定的手动映射方法进行验证。

结果

构建了动作电位持续时间(复极化30%或80%)、钙瞬变持续时间(再摄取30%或80%)、动作电位和钙瞬变交替的手动图谱,以验证软件生成图谱的准确性。手动图谱和软件图谱具有很高的准确性,对于动作电位持续时间和钙瞬变持续时间测量( = 1000 - 2000像素),超过97%的手动值和软件值相差在10毫秒以内,超过75%相差在5毫秒以内。此外,我们的软件包包括额外的测量工具,用于分析信噪比、传导速度、动作电位和钙瞬变交替以及动作电位 - 钙瞬变耦合时间,以生成具有生理意义的光学图谱。

结论

具有增强的能力,能够以令人满意的准确性进行心脏电生理、钙处理、交替以及兴奋 - 收缩偶联的测量。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/bdcfa1ac696d/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/bedd616b8a0b/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/24ce173db8c2/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/ca4b8193c22a/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/55789aa8f22c/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/e800414686d5/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/2d9ed5e88091/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/a2aa905e56dd/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/bdcfa1ac696d/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/bedd616b8a0b/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/24ce173db8c2/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/ca4b8193c22a/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/55789aa8f22c/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/e800414686d5/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/2d9ed5e88091/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/a2aa905e56dd/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47b5/11708117/bdcfa1ac696d/gr7.jpg

相似文献

1
KairoSight-3.0: A validated optical mapping software to characterize cardiac electrophysiology, excitation-contraction coupling, and alternans.KairoSight-3.0:一款经过验证的光学映射软件,用于表征心脏电生理学、兴奋-收缩偶联和交替变化。
J Mol Cell Cardiol Plus. 2023 Sep;5. doi: 10.1016/j.jmccpl.2023.100043. Epub 2023 Aug 18.
2
: A Validated Optical Mapping Software to Characterize Cardiac Electrophysiology, Excitation-Contraction Coupling, and Alternans.一种经过验证的光学映射软件,用于表征心脏电生理学、兴奋-收缩偶联和交替变化
bioRxiv. 2023 May 2:2023.05.01.538926. doi: 10.1101/2023.05.01.538926.
3
KairoSight: Open-Source Software for the Analysis of Cardiac Optical Data Collected From Multiple Species.KairoSight:用于分析从多个物种收集的心脏光学数据的开源软件。
Front Physiol. 2021 Oct 29;12:752940. doi: 10.3389/fphys.2021.752940. eCollection 2021.
4
Lights, camera, path splitter: a new approach for truly simultaneous dual optical mapping of the heart with a single camera.灯光、相机、路径分割器:一种使用单个相机对心脏进行真正同步双光学映射的新方法。
BMC Biomed Eng. 2019;1. doi: 10.1186/s42490-019-0024-x. Epub 2019 Sep 27.
5
Evaluation of novel open-source software for cardiac optical mapping.用于心脏光学映射的新型开源软件评估
J Mol Cell Cardiol Plus. 2024 Jun;8:100068. doi: 10.1016/j.jmccpl.2024.100068.
6
Multiparametric optical mapping of the Langendorff-perfused rabbit heart.Langendorff灌注兔心脏的多参数光学映射。
J Vis Exp. 2011 Sep 13(55):3160. doi: 10.3791/3160.
7
Simultaneous Quantification of Spatially Discordant Alternans in Voltage and Intracellular Calcium in Langendorff-Perfused Rabbit Hearts and Inconsistencies with Models of Cardiac Action Potentials and Ca Transients.在Langendorff灌注兔心脏中同时定量电压和细胞内钙的空间不一致交替变化以及与心脏动作电位和钙瞬变模型的不一致性。
Front Physiol. 2017 Oct 20;8:819. doi: 10.3389/fphys.2017.00819. eCollection 2017.
8
In vivo ratiometric optical mapping enables high-resolution cardiac electrophysiology in pig models.在体比率光学标测可实现猪模型的高分辨率心脏电生理学研究。
Cardiovasc Res. 2019 Sep 1;115(11):1659-1671. doi: 10.1093/cvr/cvz039.
9
Electroanatomical Adaptations in the Guinea Pig Heart from Neonatal to Adulthood.豚鼠心脏从新生儿期到成年期的电解剖学适应性变化。
bioRxiv. 2024 Jan 30:2024.01.26.577234. doi: 10.1101/2024.01.26.577234.
10
Optocardiography and Electrophysiology Studies of Ex Vivo Langendorff-perfused Hearts.离体Langendorff灌注心脏的光学心动图和电生理学研究。
J Vis Exp. 2019 Nov 7(153). doi: 10.3791/60472.

引用本文的文献

1
Evaluation of novel open-source software for cardiac optical mapping.用于心脏光学映射的新型开源软件评估
J Mol Cell Cardiol Plus. 2024 Jun;8:100068. doi: 10.1016/j.jmccpl.2024.100068.
2
Electroanatomical adaptations in the guinea pig heart from neonatal to adulthood.豚鼠心脏从新生到成年期间的电解剖学适应性。
Europace. 2024 Jul 2;26(7). doi: 10.1093/europace/euae158.
3
Optical mapping and optogenetics in cardiac electrophysiology research and therapy: a state-of-the-art review.光学绘图与光遗传学在心脏电生理学研究与治疗中的应用:最新综述。

本文引用的文献

1
Orientation of conduction velocity vectors on cardiac mapping surfaces.心内电图标测表面上的传导速度向量定位。
Europace. 2023 Mar 30;25(3):1172-1182. doi: 10.1093/europace/euac259.
2
The effect of sex and age on ex vivo cardiac electrophysiology: insight from a guinea pig model.性别和年龄对离体心脏电生理学的影响:豚鼠模型的见解。
Am J Physiol Heart Circ Physiol. 2023 Jan 1;324(1):H141-H154. doi: 10.1152/ajpheart.00497.2022. Epub 2022 Dec 9.
3
Guidelines for assessment of cardiac electrophysiology and arrhythmias in small animals.
Europace. 2024 Feb 1;26(2). doi: 10.1093/europace/euae017.
4
Evidence for the cardiodepressive effects of the plasticizer di-2-ethylhexyl phthalate.邻苯二甲酸二(2-乙基己基)酯的心脏抑制作用的证据。
Toxicol Sci. 2023 Dec 21;197(1):79-94. doi: 10.1093/toxsci/kfad105.
小动物心脏电生理学和心律失常评估指南。
Am J Physiol Heart Circ Physiol. 2022 Dec 1;323(6):H1137-H1166. doi: 10.1152/ajpheart.00439.2022. Epub 2022 Oct 21.
4
Biological noise is a key determinant of the reproducibility and adaptability of cardiac pacemaking and EC coupling.生物噪声是心脏起搏和 EC 偶联的可重复性和适应性的关键决定因素。
J Gen Physiol. 2022 Sep 5;154(9). doi: 10.1085/jgp.202012613. Epub 2022 Apr 28.
5
Spiky: An ImageJ Plugin for Data Analysis of Functional Cardiac and Cardiomyocyte Studies.Spiky:一款用于心脏功能和心肌细胞研究数据分析的ImageJ插件。
J Imaging. 2022 Apr 1;8(4):95. doi: 10.3390/jimaging8040095.
6
Simultaneous triple-parametric optical mapping of transmembrane potential, intracellular calcium and NADH for cardiac physiology assessment.同时进行跨膜电位、细胞内钙和 NADH 的三重参数光学映射,用于心脏生理学评估。
Commun Biol. 2022 Apr 6;5(1):319. doi: 10.1038/s42003-022-03279-y.
7
In vivo and ex vivo electrophysiological study of the mouse heart to characterize the cardiac conduction system, including atrial and ventricular vulnerability.在体和离体电生理研究小鼠心脏以表征心脏传导系统,包括心房和心室易损性。
Nat Protoc. 2022 May;17(5):1189-1222. doi: 10.1038/s41596-021-00678-z. Epub 2022 Mar 21.
8
Seeing the Light: The Use of Zebrafish for Optogenetic Studies of the Heart.见微知著:斑马鱼在心脏光遗传学研究中的应用
Front Physiol. 2021 Dec 23;12:748570. doi: 10.3389/fphys.2021.748570. eCollection 2021.
9
A dataset of dual calcium and voltage optical mapping in healthy and hypertrophied murine hearts.健康和肥大的鼠心的钙和电压双光映射数据集。
Sci Data. 2021 Dec 16;8(1):314. doi: 10.1038/s41597-021-01085-5.
10
Cardiac Conduction Velocity, Remodeling and Arrhythmogenesis.心脏传导速度、重构和心律失常发生。
Cells. 2021 Oct 28;10(11):2923. doi: 10.3390/cells10112923.