Standnes Dag Chun
Equinor ASA, Sandsli, Norway.
Biophys Rep (N Y). 2023 Sep 14;3(4):100124. doi: 10.1016/j.bpr.2023.100124. eCollection 2023 Dec 13.
Uptake of oxygen by hemoglobin (Hb), described by the oxygen-Hb dissociation curve, is obviously important for the existence of all vertebrates. Its sigmoidal curve shape indicates that oxygen binds more tightly if sites already are occupied, commonly referred to as the cooperative effect. The effect has been challenging to understand and quantify ever since its experimental demonstration in 1904. Here, we derive an ab initio analytical expression for the dissociation curve based on the fundamental principle of uniform oxygen chemical potential and absolute activity throughout the system at equilibrium using the grand partition function. The resulting analytical dissociation expression therefore only has four molecular oxygen-Hb binding energies as free variables, which are determined by fitting the analytical expression to measured data. The corresponding resulting negative reaction enthalpies identified in increasing magnitude are, , , , , in the range observed experimentally. The difference between and is , smaller than the maximum enthalpy difference measured experimentally, . Hence, the cooperative effect can therefore be explained, from an energy point of view, as caused by the reaction enthalpy difference between and the three subsequent enthalpy values. No impact of Hb's spatial and structural properties is assumed. The finding highlights the importance of identifying the ligand-receptor molecular binding energies, and thereby the reaction enthalpies, under different conditions as a way for calculating not only the oxygen-Hb but ligand-receptor dissociation curves in general under various conditions, a priori, since the procedure for determining these curves ab initio has been established.
血红蛋白(Hb)对氧气的摄取情况由氧 - Hb解离曲线描述,这对所有脊椎动物的生存显然至关重要。其S形曲线表明,如果已有位点被占据,氧气会结合得更紧密,这通常被称为协同效应。自1904年该效应被实验证明以来,一直难以理解和量化。在此,我们基于平衡时整个系统中氧化学势和绝对活性均匀的基本原理,使用巨配分函数推导出解离曲线的从头算解析表达式。因此,所得的解析解离表达式仅将四个分子氧 - Hb结合能作为自由变量,这些变量通过将解析表达式拟合到测量数据来确定。在实验观察到的范围内,相应得到的按大小递增顺序排列的负反应焓为 , , , 。 与 之间的差值为 ,小于实验测量的最大焓差 。因此,从能量角度来看,协同效应可以解释为 与随后三个焓值之间的反应焓差所致。这里未假定Hb的空间和结构性质有任何影响。这一发现突出了确定不同条件下配体 - 受体分子结合能以及由此确定反应焓的重要性,这不仅是计算氧 - Hb解离曲线的一种方法,而且一般来说也是先验地计算各种条件下配体 - 受体解离曲线的方法,因为从头算确定这些曲线的程序已经确立。