Perutz M F, Wilkinson A J, Paoli M, Dodson G G
MRC Laboratory of Molecular Biology, Cambridge, United Kingdom.
Annu Rev Biophys Biomol Struct. 1998;27:1-34. doi: 10.1146/annurev.biophys.27.1.1.
In 1970, Perutz tried to put the allosteric mechanism of hemoglobin, proposed by Monod, Wyman and Changeux in 1965, on a stereochemical basis. He interpreted their two-state model in terms of an equilibrium between two alternative structures, a tense one (T) with low oxygen affinity, constrained by salt-bridges between the C-termini of the four subunits, and a relaxed one (R) lacking these bridges. The equilibrium was thought to be governed primarily by the positions of the iron atoms relative to the porphyrin: out-of-plane in five-coordinated, high-spin deoxyhemoglobin, and in-plane in six-coordinated, low-spin oxyhemoglobin. The tension exercised by the salt-bridges in the T-structure was to be transmitted to the heme-linked histidines and to restrain the movement of the iron atoms into the porphyrin plane that is necessary for oxygen binding. At the beta-hemes, the distal valine and histidine block the oxygen-combining site in the T-structure; its tension was thought to strengthen that blockage. Finally, Perutz attributed the linearity of proton release with early oxygen uptake to the sequential rupture of salt-bridges in the T-structure and to the accompanying drop in pKa of the weak bases that form part of them. Almost every feature of this mechanism has been disputed, but evidence that has come to light more than 25 years later now shows it to have been substantially correct. That new evidence is reviewed below.
1970年,佩鲁茨试图将莫诺德、怀曼和尚热于1965年提出的血红蛋白变构机制建立在立体化学基础之上。他根据两种交替结构之间的平衡来解释他们的二态模型,一种是张力态(T),氧亲和力低,受四个亚基C末端之间的盐桥限制;另一种是松弛态(R),没有这些盐桥。这种平衡被认为主要由铁原子相对于卟啉的位置决定:在五配位、高自旋的脱氧血红蛋白中,铁原子位于平面外;在六配位、低自旋的氧合血红蛋白中,铁原子位于平面内。T结构中盐桥产生的张力会传递到与血红素相连的组氨酸上,并抑制铁原子向卟啉平面移动,而这一移动是氧结合所必需的。在β-血红素处,远端缬氨酸和组氨酸在T结构中阻断氧结合位点;人们认为其张力会加强这种阻断。最后,佩鲁茨将质子释放与早期氧摄取的线性关系归因于T结构中盐桥的顺序断裂以及构成盐桥一部分的弱碱pKa的相应下降。该机制的几乎每一个特征都受到了质疑,但25多年后才被发现的证据现在表明它基本正确。下面将对这些新证据进行综述。