Imon Raihan Rahman, Kabir Talukder Md Enamul, Akhter Shahina, Islam Md Saidul, Ahammad Foysal, Anis-Ul-Haque K M, Moniruzzaman Md, Afroze Mirola, Khan Mala, Hena Mostofa Jamal Mohammad Abu, Wani Tanveer A, Uddin Mohammad Jashim, Rahman Md Mashiar
Molecular and Cellular Biology Laboratory, Department of Genetic Engineering and Biotechnology, Jashore University of Science and Technology Jashore 7408 Bangladesh
Department of Biochemistry and Biotechnology, University of Science and Technology Chittagong Foy's Lake Chittagong 4202 Bangladesh.
RSC Adv. 2023 Oct 2;13(41):28773-28784. doi: 10.1039/d3ra03923d. eCollection 2023 Sep 26.
L. is widely used in indigenous and traditional medicine, but its impact on multi-drug resistant (MDR) bacterial infections mostly remains unknown. Therefore, this study aimed to evaluate the antibacterial efficiency of methanol and ethyl acetate extracts of L. leaves (MECOL and EAECOL) against multi-drug resistant and to identify potential antibacterial agents through computational studies targeting the LasR protein. Initially, 82 compounds were identified using GC-MS analysis, and the functional groups were determined through FT-IR analysis. Both extracts of the plant exhibited dose-dependent antibacterial activity, with MICs of 104.16 ± 36.08 μg mL for MECOL and 83.33 ± 36.08 μg mL for EAECOL, and an MBC of 125 μg mL. Among the 82 compounds, 12 potential compounds were identified based on binding scores using molecular docking with the LasR protein and MM-GBSA analysis. Furthermore, screening for ADME properties, including physicochemical features, water solubility, lipophilicity, RO5 compliance, and toxicity, identified the top three compounds: methyl dihydrojasmonate, methyl benzoate, and 4a-methyl-4,4a,5,6,7,8-hexahydro-2(3)-naphthalenone, which also demonstrated binding affinity with the active site residues of the LpxC protein of the bacteria. Additionally, molecular dynamics (MD) simulations confirmed the binding reliability of these three phytochemicals to LasR's active pocket, comparable to the protein native inhibitory ligands (C12-HSL). The study offers scientific support for the traditional use of in treating bacterial infections, highlighting the potential of the three compounds as leads for developing LasR inhibitors to combat multi-drug resistant .
L. 在本土和传统医学中被广泛使用,但其对多重耐药(MDR)细菌感染的影响大多仍不为人知。因此,本研究旨在评估L. 叶的甲醇提取物和乙酸乙酯提取物(MECOL和EAECOL)对多重耐药菌的抗菌效率,并通过针对LasR蛋白的计算研究来鉴定潜在的抗菌剂。最初,通过气相色谱 - 质谱联用(GC - MS)分析鉴定出82种化合物,并通过傅里叶变换红外光谱(FT - IR)分析确定了官能团。该植物的两种提取物均表现出剂量依赖性抗菌活性,MECOL的最低抑菌浓度(MIC)为104.16 ± 36.08 μg/mL,EAECOL的MIC为83.33 ± 36.08 μg/mL,最低杀菌浓度(MBC)为125 μg/mL。在这82种化合物中,基于与LasR蛋白的分子对接结合分数和MM - GBSA分析,鉴定出12种潜在化合物。此外,对包括物理化学特征、水溶性、亲脂性、符合罗氏五规则(RO5)以及毒性等药物代谢动力学(ADME)性质进行筛选,确定了排名前三的化合物:二氢茉莉酮酸甲酯、苯甲酸甲酯和4a - 甲基 - 4,4a,5,6,7,8 - 六氢 - 2(3) - 萘酮,它们也表现出与细菌LpxC蛋白的活性位点残基具有结合亲和力。此外,分子动力学(MD)模拟证实了这三种植物化学物质与LasR活性口袋的结合可靠性,与蛋白质天然抑制配体(C12 - HSL)相当。该研究为L. 在治疗细菌感染方面的传统用途提供了科学支持,突出了这三种化合物作为开发对抗多重耐药菌的LasR抑制剂先导物的潜力。