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PPARG在下咽鳞状细胞癌化学敏感性调节网络中的作用

Role of PPARG in Chemosensitivity-Regulating Network for Hypopharyngeal Squamous Cell Carcinoma.

作者信息

Kong Fanyong, Han Boxuan, Chen Jiaming, Shen Xixi, Hou Lizhen, Fang Jugao, Lian Meng

机构信息

Department of Otorhinolaryngology, Beijing Shunyi District Hospital, Shunyi Teaching Hospital of Capital Medical University, Beijing 101300, China.

Department of Otorhinolaryngology Head and Neck Surgery, Beijing Tongren Hospital, Capital Medical University, Beijing 100730, China.

出版信息

PPAR Res. 2023 Sep 25;2023:6019318. doi: 10.1155/2023/6019318. eCollection 2023.

Abstract

PPARG has been reported to promote chemosensitivity in hypopharyngeal squamous cell carcinoma (HSCC). However, few studies tested its significance in the texture of a complex molecular network regulating chemosensitivity in HSCC. Here, we first employed RNA expression data analysis and literature data mining to uncover candidate genes related to HSCC chemosensitivity. Then, we constructed the molecular network regulating chemosensitivity in HSCC. After that, we employed degree centrality (DC) and weighted centrality (WC) to test the significance of PPARG within the regulating network. Pathway enrichment was done to study the cofunctions of PPARG and the rest of the genes within the network. The findings of our study contribute to the construction of a comprehensive network that regulates HSCC chemosensitivity, consisting of 57 genes, including PPARG. Notably, within this network, PPARG demonstrates a ranking of #5 and #13 based on DC and WC, respectively. Moreover, PPARG is connected to 29 out of the 57 genes and plays roles in multiple functional groups. These top related genes include AKT1, TP53, PTEN, MAPK1, NOTCH1, BECN1, PTGS2, SPP1, and RAC1. PPARG gets enriched in several key functional groups that have been implicated in the regulation of chemosensitivity, including those associated with the response to nutrients, vitamins, and peptides, the cellular response to chemical stress, and the regulation of hormone secretion and growth. Our results emphasize the involvement of PPARG and its interconnectedness with other genes in the regulation of HSCC chemosensitivity.

摘要

据报道,PPARG可促进下咽鳞状细胞癌(HSCC)的化疗敏感性。然而,很少有研究测试其在调节HSCC化疗敏感性的复杂分子网络结构中的意义。在此,我们首先采用RNA表达数据分析和文献数据挖掘来揭示与HSCC化疗敏感性相关的候选基因。然后,我们构建了调节HSCC化疗敏感性的分子网络。之后,我们采用度中心性(DC)和加权中心性(WC)来测试PPARG在调节网络中的意义。进行通路富集分析以研究PPARG与网络中其他基因的共同功能。我们的研究结果有助于构建一个由57个基因组成的调节HSCC化疗敏感性的综合网络,其中包括PPARG。值得注意的是,在这个网络中,基于DC和WC,PPARG分别排名第5和第13。此外,PPARG与57个基因中的29个相连,并在多个功能组中发挥作用。这些高度相关的基因包括AKT1、TP53、PTEN、MAPK1、NOTCH1、BECN1、PTGS2、SPP1和RAC1。PPARG在几个与化疗敏感性调节相关的关键功能组中富集,包括那些与对营养物质、维生素和肽的反应、细胞对化学应激的反应以及激素分泌和生长的调节相关的功能组。我们的结果强调了PPARG的参与及其与其他基因在HSCC化疗敏感性调节中的相互联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/209d/10545467/c1d6efcba6cd/PPAR2023-6019318.001.jpg

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