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鉴定一种新型Y分支结构作为锥虫mRNA加工过程中的中间体:反式剪接的证据。

Identification of a novel Y branch structure as an intermediate in trypanosome mRNA processing: evidence for trans splicing.

作者信息

Murphy W J, Watkins K P, Agabian N

出版信息

Cell. 1986 Nov 21;47(4):517-25. doi: 10.1016/0092-8674(86)90616-1.

DOI:10.1016/0092-8674(86)90616-1
PMID:3779835
Abstract

We present evidence that addition of the 35 nucleotide spliced leader (SL) to the 5' end of T. brucei mRNAs occurs via trans RNA splicing. A 100 nucleotide fragment of the 135 base SL RNA (100-mer) is revealed by S1 nuclease analysis of total and poly(A)+ RNA. This 100-mer is not detected by Northern hybridization analysis, indicating that it does not exist free in the cell. The 5' end of the 100-mer maps precisely to the conserved splice junction sequence of the SL RNA. Purified debranching enzyme releases this 100-mer RNA as a free, 100 nucleotide species. This indicates that the 100-mer is covalently linked to poly(A)+ RNA by a 2'-5' phosphodiester bond, that the branched intermediate has a discontinuous intron or Y structure (rather than a lariat), which is expected of a trans-spliced mRNA, and that the SL RNA is indeed the donor of the SL sequence to trypanosome mRNAs.

摘要

我们提供的证据表明,布氏锥虫mRNA的5'端添加35个核苷酸的剪接前导序列(SL)是通过反式RNA剪接发生的。通过对总RNA和聚腺苷酸加尾RNA(poly(A)+ RNA)进行S1核酸酶分析,揭示了135个碱基的SL RNA的一个100个核苷酸的片段(100聚体)。Northern杂交分析未检测到该100聚体,表明它在细胞中不是游离存在的。100聚体的5'端精确地定位到SL RNA的保守剪接连接序列。纯化的去分支酶释放出作为游离的100个核苷酸物种的该100聚体RNA。这表明该100聚体通过2'-5'磷酸二酯键与聚腺苷酸加尾RNA共价连接,分支中间体具有不连续的内含子或Y结构(而不是套索结构),这是反式剪接mRNA所预期的,并且SL RNA确实是锥虫mRNA的SL序列的供体。

相似文献

1
Identification of a novel Y branch structure as an intermediate in trypanosome mRNA processing: evidence for trans splicing.鉴定一种新型Y分支结构作为锥虫mRNA加工过程中的中间体:反式剪接的证据。
Cell. 1986 Nov 21;47(4):517-25. doi: 10.1016/0092-8674(86)90616-1.
2
Evidence for trans splicing in trypanosomes.锥虫中反式剪接的证据。
Cell. 1986 Nov 21;47(4):527-35. doi: 10.1016/0092-8674(86)90617-3.
3
A 5' spliced leader is added in trans to both alpha- and beta-tubulin transcripts in Trypanosoma brucei.在布氏锥虫中,一个5'剪接前导序列以反式方式添加到α-微管蛋白和β-微管蛋白转录本上。
Proc Natl Acad Sci U S A. 1985 Sep;82(17):5695-9. doi: 10.1073/pnas.82.17.5695.
4
Identification of a small RNA containing the trypanosome spliced leader: a donor of shared 5' sequences of trypanosomatid mRNAs?一种含有锥虫剪接前导序列的小RNA的鉴定:锥虫mRNA共享5'序列的供体?
Cell. 1984 Oct;38(3):721-9. doi: 10.1016/0092-8674(84)90267-8.
5
Trans splicing in trypanosomes requires methylation of the 5' end of the spliced leader RNA.锥虫中的反式剪接需要剪接前导RNA 5'端的甲基化。
Proc Natl Acad Sci U S A. 1991 Nov 15;88(22):10074-8. doi: 10.1073/pnas.88.22.10074.
6
Mapping of branch sites in trans-spliced pre-mRNAs of Trypanosoma brucei.布氏锥虫反式剪接前体mRNA中分支位点的定位
Mol Cell Biol. 1989 Oct;9(10):4291-7. doi: 10.1128/mcb.9.10.4291-4297.1989.
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Lariat structures are in vivo intermediates in yeast pre-mRNA splicing.套索结构是酵母前体mRNA剪接过程中的体内中间体。
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Structure-function analysis of the trypanosomatid spliced leader RNA.锥虫剪接前导RNA的结构-功能分析
Nucleic Acids Res. 1998 May 1;26(9):2200-7. doi: 10.1093/nar/26.9.2200.
9
Destruction of U2, U4, or U6 small nuclear RNA blocks trans splicing in trypanosome cells.U2、U4或U6小核RNA的破坏会阻断锥虫细胞中的反式剪接。
Cell. 1990 May 4;61(3):459-66. doi: 10.1016/0092-8674(90)90527-l.
10
Trypanosome mRNAs have unusual "cap 4" structures acquired by addition of a spliced leader.锥虫信使核糖核酸(mRNA)具有通过添加剪接前导序列而获得的不寻常的“帽4”结构。
Proc Natl Acad Sci U S A. 1987 Dec;84(23):8190-4. doi: 10.1073/pnas.84.23.8190.

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