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sp. nov.,从药用植物的发酵果实中分离得到。

sp. nov., isolated from the fermented fruit of a medicinal plant.

机构信息

Department of Life Science, Dongguk University-Seoul, Goyang 10326, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2023 Oct;73(10). doi: 10.1099/ijsem.0.006086.

DOI:10.1099/ijsem.0.006086
PMID:37801075
Abstract

A facultative anaerobic and Gram-negative strain, designated RP14, was isolated from the fruit of fermented for 60 days at 25°C. Strain RP14 showed 98.0 % 16S rRNA similarity to IFO 15243, but in the phylogenetic tree, NIBRBAC000500504 was its closest neighbour. The average nucleotide identity and digital DNA-DNA hybridization values between strain RP14 and 15 genomes of type strains of , were 73.8-74.4% and 16.4-20.2 %, respectively, which were lower than the recommended thresholds for species delineation. The strain grew at 25-32°C (optimum, 28°C), at pH 7.0-12.0 (optimum, pH 9.0) and with 0-2% NaCl (optimum, 0 %; w/v). Cells of strain RP14 were catalase-positive, oxidase-negative, rod-shaped and formed yellow-coloured colonies. The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The major fatty acid were C, C cyclo 8 and summed feature 8 (C 7 and/or C 6). The DNA G+C content was 62.8 mol%. Based on polyphasic evidence, we propose sp. nov as a novel species within the genus The type strain is RP14 (=KACC 22720=TBRC 16341).

摘要

一株兼性厌氧革兰氏阴性菌株,命名为 RP14,从发酵 60 天的水果中分离得到,发酵温度为 25°C。菌株 RP14 与 IFO 15243 的 16S rRNA 相似性为 98.0%,但在系统发育树中,NIBRBAC000500504 是其最接近的近缘种。菌株 RP14 与 15 株模式菌株的平均核苷酸同一性和数字 DNA-DNA 杂交值分别为 73.8-74.4%和 16.4-20.2%,均低于种界定的推荐阈值。该菌株在 25-32°C(最佳温度为 28°C)、pH 7.0-12.0(最佳 pH 为 9.0)和 0-2%NaCl(最佳为 0%;w/v)的条件下生长。菌株 RP14 的细胞呈过氧化氢酶阳性、氧化酶阴性、杆状,形成黄色菌落。主要极性脂为磷脂酰乙醇胺、双磷脂酰甘油和磷脂酰甘油。主要脂肪酸为 C 16:0、C 18:1 cyclo 和特征脂肪酸 8(C 7 和/或 C 6)。DNA G+C 含量为 62.8 mol%。基于多相证据,我们建议将 sp. nov. 作为该属中的一个新种。模式菌株为 RP14(=KACC 22720=TBRC 16341)。

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