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基于伴随逆求解器的细胞核弹性成像

Cell nucleus elastography with the adjoint-based inverse solver.

作者信息

Mei Yue, Feng Xuan, Jin Yun, Kang Rongyao, Wang XinYu, Zhao Dongmei, Ghosh Soham, Neu Corey P, Avril Stephane

机构信息

State Key Laboratory of Structural Analysis, Optimization and CAE Software for Industrial Equipment, Department of Engineering Mechanics, Dalian University of Technology, Dalian 116023, China; International Research Center for Computational Mechanics, Dalian University of Technology, Dalian 116023, China; Ningbo Institute of Dalian University of Technology, No. 26 Yucai Road, Jiangbei District, Ningbo 315016, China.

State Key Laboratory of Structural Analysis, Optimization and CAE Software for Industrial Equipment, Department of Engineering Mechanics, Dalian University of Technology, Dalian 116023, China; International Research Center for Computational Mechanics, Dalian University of Technology, Dalian 116023, China.

出版信息

Comput Methods Programs Biomed. 2023 Dec;242:107827. doi: 10.1016/j.cmpb.2023.107827. Epub 2023 Sep 29.

Abstract

BACKGROUND AND OBJECTIVES

The mechanics of the nucleus depends on cellular structures and architecture, and impact a number of diseases. Nuclear mechanics is yet rather complex due to heterogeneous distribution of dense heterochromatin and loose euchromatin domains, giving rise to spatially variable stiffness properties.

METHODS

In this study, we propose to use the adjoint-based inverse solver to identify for the first time the nonhomogeneous elastic property distribution of the nucleus. Inputs of the inverse solver are deformation fields measured with microscopic imaging in contracting cardiomyocytes.

RESULTS

The feasibility of the proposed method is first demonstrated using simulated data. Results indicate accurate identification of the assumed heterochromatin region, with a maximum relative error of less than 5%. We also investigate the influence of unknown Poisson's ratio on the reconstruction and find that variations of the Poisson's ratio in the range [0.3-0.5] result in uncertainties of less than 15% in the identified stiffness. Finally, we apply the inverse solver on actual deformation fields acquired within the nuclei of two cardiomyocytes. The obtained results are in good agreement with the density maps obtained from microscopy images.

CONCLUSIONS

Overall, the proposed approach shows great potential for nuclear elastography, with promising value for emerging fields of mechanobiology and mechanogenetics.

摘要

背景与目的

细胞核的力学特性取决于细胞结构和架构,并对多种疾病产生影响。由于致密异染色质和松散常染色质结构域的异质分布,细胞核力学仍然相当复杂,从而导致空间可变的刚度特性。

方法

在本研究中,我们首次提出使用基于伴随的逆求解器来识别细胞核的非均匀弹性特性分布。逆求解器的输入是通过显微镜成像在收缩心肌细胞中测量的变形场。

结果

首先使用模拟数据证明了所提出方法的可行性。结果表明能够准确识别假定的异染色质区域,最大相对误差小于5%。我们还研究了未知泊松比对重建的影响,发现泊松比在[0.3 - 0.5]范围内的变化导致识别出的刚度不确定性小于15%。最后,我们将逆求解器应用于在两个心肌细胞核内获取的实际变形场。所得结果与从显微镜图像获得的密度图高度一致。

结论

总体而言,所提出的方法在细胞核弹性成像方面显示出巨大潜力,在力学生物学和机械遗传学等新兴领域具有可观的价值。

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