Department of Spine Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, China.
The Key Laboratory of Myocardial Ischemia, Chinese Ministry of Education, Harbin, China.
J Orthop Surg Res. 2023 Oct 7;18(1):757. doi: 10.1186/s13018-023-04254-x.
N6-methyl adenosine (m6A) is the most common reversible mRNA modification in eukaryotes implicated in key roles in various biological processes. The purpose of our analysis was to examine the association of ankylosing spondylitis (AS) with m6A methylation.
We obtained 72 samples from the data set GSE73754, including 52 AS patients and 20 healthy people. We divided the samples into two groups: the experimental group and the control group, and then observed the differences of 26 m6A related genes in the two groups. We also analyzed the correlation between different m6A genes. We used a random forest tree model to screen seven m6A signature genes associated with AS to evaluate its prevalence. Next, the samples were classified according to the m6a content and differential genes. Immune analysis, gene ontology, and KEGG enrichment analyses were performed. Finally, we scored each sample with m6a and analyzed the relationship between different samples and inflammation-related factors.
In conclusion, we screened out AS-related genes and the nomogram showed that they were negatively correlated with the incidence of AS. And we found that AS may have some relationship with immunity. Our analysis results could provide further insights into the treatment of AS.
N6-甲基腺苷(m6A)是真核生物中最常见的可反转 mRNA 修饰,涉及多种生物学过程中的关键作用。我们分析的目的是研究强直性脊柱炎(AS)与 m6A 甲基化的关联。
我们从数据集 GSE73754 中获得了 72 个样本,包括 52 例 AS 患者和 20 例健康人。我们将样本分为两组:实验组和对照组,然后观察两组中 26 个 m6A 相关基因的差异。我们还分析了不同 m6A 基因之间的相关性。我们使用随机森林树模型筛选出与 AS 相关的七个 m6A 特征基因,以评估其患病率。接下来,根据 m6a 含量和差异基因对样本进行分类。进行免疫分析、基因本体和 KEGG 富集分析。最后,我们对每个样本进行 m6a 评分,并分析不同样本与炎症相关因素之间的关系。
总之,我们筛选出与 AS 相关的基因,列线图显示它们与 AS 的发病率呈负相关。并且我们发现 AS 可能与免疫有一定关系。我们的分析结果可为 AS 的治疗提供进一步的见解。