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微流控流式细胞术的进展使单细胞电学和结构特性的高通量表征成为可能。

Advance of microfluidic flow cytometry enabling high-throughput characterization of single-cell electrical and structural properties.

机构信息

State Key Laboratory of Transducer Technology, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, People's Republic of China.

School of Electronic, Electrical and Communication Engineering, University of Chinese Academy of Sciences, Beijing, People's Republic of China.

出版信息

Cytometry A. 2024 Feb;105(2):139-145. doi: 10.1002/cyto.a.24806. Epub 2023 Oct 10.

Abstract

This paper reported a micro flow cytometer capable of high-throughput characterization of single-cell electrical and structural features based on constrictional microchannels and deep neural networks. When single cells traveled through microchannels with constricted cross-sectional areas, they effectively blocked concentrated electric field lines, producing large impedance variations. Meanwhile, the traveling cells were confined within the cross-sectional areas of the constrictional microchannels, enabling the capture of high-quality images without losing focuses. Then single-cell features from impedance profiles and optical images were extracted from customized recurrent and convolution networks (RNN and CNN), which were further fused for cell-type classification based on support vector machines (SVM). As a demonstration, two leukemia cell lines (e.g., HL60 vs. Jurkat) were analyzed, producing high-classification accuracies of 99.3% based on electrical features extracted from Long Short-Term Memory (LSTM) of RNN, 96.7% based on structural features extracted from Resnet18 of CNN and 100.0% based on combined features enabled by SVM. The microfluidic flow cytometry developed in this study may provide a new perspective for the field of single-cell analysis.

摘要

本文报道了一种基于约束微通道和深度神经网络的高通量单细胞电学和结构特征分析的微流控芯片。当单个细胞通过具有收缩截面积的微通道时,它们有效地阻塞了集中的电场线,产生了大的阻抗变化。同时,流动的细胞被限制在约束微通道的截面积内,能够在不失焦的情况下捕获高质量的图像。然后,从阻抗谱和光学图像中提取单细胞特征,这些特征是从定制的递归和卷积网络(RNN 和 CNN)中提取的,进一步融合基于支持向量机(SVM)的细胞类型分类。作为一个演示,分析了两种白血病细胞系(例如 HL60 与 Jurkat),基于 RNN 的长短期记忆(LSTM)提取的电学特征,分类准确率达到 99.3%;基于 Resnet18 提取的结构特征,分类准确率达到 96.7%;基于 SVM 融合的特征,分类准确率达到 100.0%。本研究开发的微流控流式细胞仪可能为单细胞分析领域提供新的视角。

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