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通过转录组分析探究幼虫对低盐环境适应的机制

Investigating the Mechanism of Low-Salinity Environmental Adaptation in Larvae through Transcriptome Profiling.

作者信息

Wang Yongjie, Liu Xiumei, Wang Weijun, Sun Guohua, Xu Xiaohui, Feng Yanwei, Li Zan, Yang Jianmin

机构信息

School of Agriculture, Ludong University, Yantai 264025, China.

College of Life Sciences, Yantai University, Yantai 264005, China.

出版信息

Animals (Basel). 2023 Oct 8;13(19):3139. doi: 10.3390/ani13193139.

Abstract

is an economically important mollusk distributed in the coastal waters of China. Juveniles are more susceptible to stimulation by the external environment than mature individuals. The ocean salinity fluctuates due to environmental changes. However, there is a lack of research on the salinity adaptations of . Therefore, in this study, we investigated the differential expression of genes in larvae after stimulation by low salinity. RNA samples were sequenced and 1039 differentially expressed genes (DEGs) were identified. Then, enrichment analysis was performed using the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases. Finally, a protein-protein interaction network (PPI) was constructed, and the functions of key genes in larvae after low-salinity stimulation were explored. We suggest that low salinity leads to an excess proliferation of cells in larvae that, in turn, affects normal physiological activities. The results of this study can aid in the artificial incubation of and reduce the mortality of larvae.

摘要

是一种分布于中国沿海水域的具有重要经济价值的软体动物。幼体比成熟个体更容易受到外部环境的刺激。由于环境变化,海洋盐度会波动。然而,关于……的盐度适应性缺乏研究。因此,在本研究中,我们调查了低盐度刺激后……幼虫中基因的差异表达。对RNA样本进行测序,鉴定出1039个差异表达基因(DEGs)。然后,使用基因本体论(GO)和京都基因与基因组百科全书(KEGG)数据库进行富集分析。最后,构建了蛋白质-蛋白质相互作用网络(PPI),并探索了低盐度刺激后……幼虫中关键基因的功能。我们认为低盐度导致……幼虫中的细胞过度增殖,进而影响正常生理活动。本研究结果有助于……的人工孵化并降低幼虫死亡率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32f2/10571815/52162e03642d/animals-13-03139-g001.jpg

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