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探索巴西生物多样性中的天然生物碱作为保幼激素酶抑制剂的潜力:一种用于病媒蚊虫控制的计算方法。

Exploring Natural Alkaloids from Brazilian Biodiversity as Potential Inhibitors of the Juvenile Hormone Enzyme: A Computational Approach for Vector Mosquito Control.

机构信息

Laboratory of Biosolutions and Bioplastics of the Amazon, Graduate Program in Science and Environment, Institute of Exact and Natural Sciences, Federal University of Pará (UFPA), Belém 66075-110, PA, Brazil.

Laboratory of Molecular Biology, Evolution and Microbiology, Federal Institute of Education, Science and Technology of Pará (IFPA) Campus Abaetetuba, Abaetetuba 68440-000, PA, Brazil.

出版信息

Molecules. 2023 Sep 29;28(19):6871. doi: 10.3390/molecules28196871.

DOI:10.3390/molecules28196871
PMID:37836714
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10574778/
Abstract

This study explores the potential inhibitory activity of alkaloids, a class of natural compounds isolated from Brazilian biodiversity, against the mJHBP enzyme of the mosquito. This mosquito is a significant vector of diseases such as dengue, zika, and chikungunya. The interactions between the ligands and the enzyme at the molecular level were evaluated using computational techniques such as molecular docking, molecular dynamics (MD), and molecular mechanics with generalized Born surface area (MMGBSA) free energy calculation. The findings suggest that these compounds exhibit a high binding affinity with the enzyme, as confirmed by the binding free energies obtained in the simulation. Furthermore, the specific enzyme residues that contribute the most to the stability of the complex with the compounds were identified: specifically, Tyr33, Trp53, Tyr64, and Tyr129. Notably, Tyr129 residues were previously identified as crucial in the enzyme inhibition process. This observation underscores the significance of the research findings and the potential of the evaluated compounds as natural insecticides against mosquitoes. These results could stimulate the development of new vector control agents that are more efficient and environmentally friendly.

摘要

这项研究探索了生物碱的潜在抑制活性,生物碱是从巴西生物多样性中分离出来的一类天然化合物,针对的是蚊子的 mJHBP 酶。这种蚊子是登革热、寨卡和基孔肯雅热等疾病的重要传播媒介。利用分子对接、分子动力学 (MD) 和分子力学与广义 Born 表面积 (MMGBSA) 自由能计算等计算技术,评估了配体与酶在分子水平上的相互作用。研究结果表明,这些化合物与酶表现出很高的结合亲和力,这一点得到了模拟中获得的结合自由能的证实。此外,还确定了对化合物与酶形成复合物稳定性贡献最大的特定酶残基:具体来说,是 Tyr33、Trp53、Tyr64 和 Tyr129。值得注意的是,Tyr129 残基先前被确定为酶抑制过程中的关键残基。这一观察结果突出了研究结果的重要性以及评估化合物作为天然杀虫剂防治蚊子的潜力。这些结果可能会刺激开发更高效、更环保的新型病媒控制剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/8fd0e79bcf6e/molecules-28-06871-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/f36aaee16d75/molecules-28-06871-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/d135164ae866/molecules-28-06871-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/37d6d3a4e4ff/molecules-28-06871-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/ccd4ad58b93b/molecules-28-06871-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/1a16cdaa4fa0/molecules-28-06871-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/d7c8ca632d95/molecules-28-06871-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/8fd0e79bcf6e/molecules-28-06871-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/f36aaee16d75/molecules-28-06871-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/d135164ae866/molecules-28-06871-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/37d6d3a4e4ff/molecules-28-06871-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/ccd4ad58b93b/molecules-28-06871-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/1a16cdaa4fa0/molecules-28-06871-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/d7c8ca632d95/molecules-28-06871-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7492/10574778/8fd0e79bcf6e/molecules-28-06871-g007.jpg

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