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利用转录组学和蛋白质组学揭示嗜热菌热应激反应的时间动态和调控网络。

Uncovering the temporal dynamics and regulatory networks of thermal stress response in a hyperthermophile using transcriptomics and proteomics.

机构信息

Institute of Biochemistry, Genetics and Microbiology, Institute of Microbiology and Archaea Centre, Single-Molecule Biochemistry Lab and Regensburg Center for Biochemistry, University of Regensburg, Regensburg, Germany.

Bioanalytical Mass Spectrometry Group, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.

出版信息

mBio. 2023 Dec 19;14(6):e0217423. doi: 10.1128/mbio.02174-23. Epub 2023 Oct 16.

Abstract

Extreme environments provide unique challenges for life, and the study of extremophiles can shed light on the mechanisms of adaptation to such conditions. , a hyperthermophilic archaeon, is a model organism for studying thermal stress response mechanisms. In this study, we used an integrated analysis of RNA-sequencing and mass spectrometry data to investigate the transcriptomic and proteomic responses of to heat and cold shock stress and recovery. Our results reveal the rapid and dynamic changes in gene and protein expression patterns associated with these stress responses, as well as the coordinated regulation of different gene sets in response to different stressors. These findings provide valuable insights into the molecular adaptations that facilitate life in extreme environments and advance our understanding of stress response mechanisms in hyperthermophilic archaea.

摘要

极端环境给生命带来了独特的挑战,而研究极端微生物可以揭示适应这些条件的机制。 是一种高温古菌,是研究热应激响应机制的模式生物。在这项研究中,我们使用 RNA 测序和质谱数据的综合分析来研究 对热和冷休克应激及恢复的转录组和蛋白质组反应。我们的结果揭示了与这些应激反应相关的基因和蛋白质表达模式的快速和动态变化,以及不同基因集对不同胁迫的协调调控。这些发现为促进极端环境中生命的分子适应提供了有价值的见解,并增进了我们对高温古菌应激响应机制的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cee5/10746257/5b0734de484b/mbio.02174-23.f001.jpg

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