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IPTG(异丙基硫代-β-半乳糖苷)跨大肠杆菌细胞质膜运输的机制方面-在重组蛋白表达诱导中的限速步骤。

Mechanistic aspects of IPTG (isopropylthio-β-galactoside) transport across the cytoplasmic membrane of Escherichia coli-a rate limiting step in the induction of recombinant protein expression.

机构信息

Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London SE1 9NH, UK.

Faculdade de Ciências Farmacêuticas, Universidade de São Paulo, Av. Prof. Lineu Prestes, 580, B16, 05508-000 São Paulo, SP, Brazil.

出版信息

J Ind Microbiol Biotechnol. 2023 Feb 17;50(1). doi: 10.1093/jimb/kuad034.

Abstract

UNLABELLED

Coupling transcription of a cloned gene to the lac operon with induction by isopropylthio-β-galactoside (IPTG) has been a favoured approach for recombinant protein expression using Escherichia coli as a heterologous host for more than six decades. Despite a wealth of experimental data gleaned over this period, a quantitative relationship between extracellular IPTG concentration and consequent levels of recombinant protein expression remains surprisingly elusive across a broad spectrum of experimental conditions. This is because gene expression under lac operon regulation is tightly correlated with intracellular IPTG concentration due to allosteric regulation of the lac repressor protein (lacY). An in-silico mathematical model established that uptake of IPTG across the cytoplasmic membrane of E. coli by simple diffusion was negligible. Conversely, lacY mediated active transport was a rapid process, taking only some seconds for internal and external IPTG concentrations to equalize. Optimizing kcat and KM parameters by targeted mutation of the galactoside binding site in lacY could be a future strategy to improve the performance of recombinant protein expression. For example, if kcat were reduced whilst KM was increased, active transport of IPTG across the cytoplasmic membrane would be reduced, thereby lessening the metabolic burden on the cell and expediating accumulation of recombinant protein. The computational model described herein is made freely available and is amenable to optimize recombinant protein expression in other heterologous hosts.

ONE-SENTENCE SUMMARY: A computational model made freely available to optimize recombinant protein expression in Escherichia coli other heterologous hosts.

摘要

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将克隆基因的转录与异丙基硫代-β-半乳糖苷(IPTG)的诱导偶联,已成为在大肠杆菌中作为异源宿主表达重组蛋白的一种首选方法,这种方法已经使用了六十多年。尽管在这期间积累了大量的实验数据,但在广泛的实验条件下,细胞外 IPTG 浓度与重组蛋白表达水平之间的定量关系仍然难以捉摸。这是因为由于乳糖阻遏蛋白(lacY)的变构调节,基因表达在乳糖操纵子的调控下与细胞内 IPTG 浓度紧密相关。一个建立在计算机上的数学模型表明,大肠杆菌质膜对 IPTG 的简单扩散摄取可以忽略不计。相反,lacY 介导的主动运输是一个快速的过程,只需几秒钟即可使内部和外部的 IPTG 浓度达到平衡。通过靶向突变 lacY 中的半乳糖苷结合位点来优化 kcat 和 KM 参数,可能是提高重组蛋白表达性能的未来策略。例如,如果 kcat 降低而 KM 增加,则 IPTG 穿过质膜的主动运输将减少,从而减轻细胞的代谢负担并加速重组蛋白的积累。本文描述的计算模型是免费提供的,并且可以优化其他异源宿主中的重组蛋白表达。

一句话总结

本文提供了一个免费的计算模型,可用于优化其他异源宿主中重组蛋白的表达。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/599a/10639102/2a27f5a52d9c/kuad034fig1g.jpg

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