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单细胞基因组学在法医学中的应用:现状与未来方向。

Single cell genomics applications in forensic science: Current state and future directions.

作者信息

Huffman Kaitlin, Ballantyne Jack

机构信息

Graduate Program in Chemistry, Department of Chemistry, University of Central Florida, PO Box 162366, Orlando, FL 32816-2366, USA.

National Center for Forensic Science, PO Box 162367, Orlando, FL 32816-2367, USA.

出版信息

iScience. 2023 Sep 23;26(11):107961. doi: 10.1016/j.isci.2023.107961. eCollection 2023 Nov 17.

Abstract

Standard methods of mixture analysis involve subjecting a dried crime scene sample to a "bulk" DNA extraction method such that the resulting isolate compromises a homogenized DNA mixture from the individual donors. If, however, instead of bulk DNA extraction, a sufficient number of individual cells from the mixed stain are subsampled prior to genetic analysis then it should be possible to recover highly probative single source, non-mixed scDNA profiles from each of the donors. This approach can detect low DNA level minor donors to a mixture that otherwise would not be identified using standard methods and can also resolve rare mixtures comprising first degree relatives and thereby also prevent the false inclusion of non-donor relatives. This literature landscape review and associated commentary reports on the history and increasing interest in current and potential future applications of scDNA in forensic genomics, and critically evaluates opportunities and impediments to further progress.

摘要

标准的混合物分析方法包括对干燥的犯罪现场样本进行“批量”DNA提取,以使得到的分离物包含来自各个供体的均质DNA混合物。然而,如果在进行基因分析之前,从混合污渍中对足够数量的单个细胞进行二次采样,而不是进行批量DNA提取,那么应该有可能从每个供体中获得高度 probative 的单源、非混合 scDNA 图谱。这种方法可以检测出混合物中DNA含量低的次要供体,否则使用标准方法无法识别,还可以解析包含一级亲属的罕见混合物,从而也能防止非供体亲属的错误纳入。这篇文献综述及相关评论报告了scDNA在法医基因组学中的历史以及对当前和潜在未来应用的兴趣日益增加,并批判性地评估了进一步进展的机会和障碍。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7261/10590970/28cf9e529084/fx1.jpg

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