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一种基于格拉斯曼流形上密度矩阵外推的准时间可逆格式用于玻恩-奥本海默分子动力学

A Quasi Time-Reversible Scheme Based on Density Matrix Extrapolation on the Grassmann Manifold for Born-Oppenheimer Molecular Dynamics.

作者信息

Pes Federica, Polack Étienne, Mazzeo Patrizia, Dusson Geneviève, Stamm Benjamin, Lipparini Filippo

机构信息

Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56124 Pisa, Italy.

CERMICS, École des Ponts and Inria Paris, 6 & 8 avenue Blaise Pascal, 77455 Marne-la-Valée, France.

出版信息

J Phys Chem Lett. 2023 Nov 2;14(43):9720-9726. doi: 10.1021/acs.jpclett.3c02098. Epub 2023 Oct 25.

Abstract

This Letter introduces the so-called Quasi Time-Reversible scheme based on Grassmann extrapolation (QTR G-Ext) of density matrices for an accurate calculation of initial guesses in Born-Oppenheimer Molecular Dynamics (BOMD) simulations. The method shows excellent results on four large molecular systems that are representative of real-life production applications, ranging from 21 to 94 atoms simulated with Kohn-Sham (KS) density functional theory surrounded with a classical environment with 6k to 16k atoms. Namely, it clearly reduces the number of self-consistent field iterations while at the same time achieving energy-conserving simulations, resulting in a considerable speed-up of BOMD simulations even when tight convergence of the KS equations is required.

摘要

本信函介绍了一种基于密度矩阵格拉斯曼外推法的所谓准时间可逆方案(QTR G-Ext),用于在玻恩-奥本海默分子动力学(BOMD)模拟中精确计算初始猜测值。该方法在四个大型分子系统上展现出优异的结果,这些系统代表了实际生产应用,从21个原子到94个原子,采用含时密度泛函理论(KS)进行模拟,并处于由6k至16k个原子组成的经典环境中。具体而言,它显著减少了自洽场迭代次数,同时实现了能量守恒模拟,即使在需要严格收敛KS方程的情况下,也能大幅加速BOMD模拟。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/116d/10626629/11ea1398e754/jz3c02098_0001.jpg

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