Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56124 Pisa, Italy.
J Phys Chem Lett. 2023 Feb 9;14(5):1222-1229. doi: 10.1021/acs.jpclett.2c03797. Epub 2023 Jan 30.
The excited-state dynamics of molecules embedded in complex (bio)matrices is still a challenging goal for quantum chemical models. Hybrid QM/MM models have proven to be an effective strategy, but an optimal combination of accuracy and computational cost still has to be found. Here, we present a method which combines the accuracy of a polarizable embedding QM/MM approach with the computational efficiency of an excited-state self-consistent field method. The newly implemented method is applied to the photoactivation of the blue-light-using flavin (BLUF) domain of the AppA protein. We show that the proton-coupled electron transfer (PCET) process suggested for other BLUF proteins is still valid also for AppA.
将分子的激发态动力学嵌入复杂(生物)基质中仍然是量子化学模型的一个具有挑战性的目标。混合 QM/MM 模型已被证明是一种有效的策略,但仍需要找到准确性和计算成本的最佳组合。在这里,我们提出了一种方法,将极化嵌入 QM/MM 方法的准确性与激发态自洽场方法的计算效率相结合。新实现的方法应用于 AppA 蛋白的蓝光利用黄素(BLUF)结构域的光激活。我们表明,其他 BLUF 蛋白中提出的质子耦合电子转移(PCET)过程对于 AppA 仍然有效。