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用于更稳健的玻恩-奥本海默分子动力学的卡-帕里尼罗监测器

Car-Parrinello Monitor for More Robust Born-Oppenheimer Molecular Dynamics.

作者信息

Wang Lee-Ping, Song Chenchen

机构信息

Department of Chemistry , University of California , 1 Shields Ave , Davis , California 95616 , United States.

Department of Chemistry and the PULSE Institute , Stanford University , Stanford , California 94305 , United States.

出版信息

J Chem Theory Comput. 2019 Aug 13;15(8):4454-4467. doi: 10.1021/acs.jctc.9b00439. Epub 2019 Aug 1.

Abstract

Born-Oppenheimer molecular dynamics (BOMD) is a promising simulation method for exploring the possible reaction pathways of a chemical system, but one significant challenge is the increased difficulty of converging the self-consistent field (SCF) calculation that often accompanies the breaking and forming of chemical bonds. To address this challenge, we developed an enhancement to the BOMD simulation method called the Car-Parrinello monitor (CPMonitor) that uses Car-Parrinello molecular dynamics (CPMD) to recover from SCF convergence failures. CPMonitor works by detecting SCF convergence failures in BOMD and switching to a CPMD Hamiltonian to propagate through the region of configuration space where the SCF calculation is unable to converge, then switching back to BOMD when good convergence behavior is re-established. We present a series of simulation studies that use CPMonitor, including detailed studies of the thermodynamic and dynamical properties of simple systems, as well as nanoreactor simulations containing transition metal atoms that were previously not possible to simulate using standard BOMD methods. Our studies show that CPMonitor can make BOMD simulations robust to SCF convergence difficulties and improve simulation performance and stability in reaction discovery applications.

摘要

玻恩-奥本海默分子动力学(BOMD)是一种很有前景的模拟方法,用于探索化学体系可能的反应路径,但一个重大挑战是,化学键的断裂和形成常常伴随着自洽场(SCF)计算收敛难度的增加。为应对这一挑战,我们开发了一种对BOMD模拟方法的改进方法,称为卡-帕里尼罗监测器(CPMonitor),它利用卡-帕里尼罗分子动力学(CPMD)从SCF收敛失败中恢复。CPMonitor的工作原理是在BOMD中检测SCF收敛失败,并切换到CPMD哈密顿量,以在SCF计算无法收敛的构型空间区域中进行传播,然后在重新建立良好的收敛行为时再切换回BOMD。我们展示了一系列使用CPMonitor的模拟研究,包括对简单体系的热力学和动力学性质的详细研究,以及包含过渡金属原子的纳米反应器模拟,而这些模拟用标准的BOMD方法以前是无法实现的。我们的研究表明,CPMonitor可以使BOMD模拟对SCF收敛困难具有鲁棒性,并在反应发现应用中提高模拟性能和稳定性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2807/9749491/1987639ca663/nihms-1847834-f0001.jpg

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