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利用 Tetep 衍生系 RIL4 进行叶瘟抗性的遗传和分子分析及其与 Pita/Pita 位点基因的关系。

Genetic and molecular analysis of leaf blast resistance in Tetep derived line RIL4 and its relationship to genes at Pita/Pita locus.

机构信息

CSK Himachal Pradesh Agricultural University, Palampur, 176062, India.

College of Horticulture and Forestry, Dr YSP University of Horticulture and Forestry, Thunag, 175048, India.

出版信息

Sci Rep. 2023 Oct 31;13(1):18683. doi: 10.1038/s41598-023-46070-7.

Abstract

The Vietnamese indica landrace 'Tetep' is known worldwide for its durable and broad spectrum-resistance to blast. We performed genetic and molecular analyses of leaf blast resistance in a Tetep derived recombinant inbred line 'RIL4' which is resistant to both leaf and neck blast. Phenotypic analysis of segregating F progenies suggested that leaf blast resistance in RIL4 was controlled by a dominant gene tentatively designated as Pi-l(t). The gene was mapped to a 2.4 cm region close to the centromere of chromosome 12. The search for the gene content in the equivalent genomic region of reference cv. Nipponbare revealed the presence of five NBS-LRR genes, two of which corresponded to the alleles of Pita and Pi67 genes previously identified from Tetep. The two other genes, LOC_Os12g17090, and LOC_Os12g17490 represented the homologs of stripe rust resistance gene Yr10. The allelic tests with Pita2 and Pi67 lines suggested that the leaf blast resistance gene in RIL4 is either allelic or tightly linked to these genes. The genomic position of the leaf blast resistance gene in RIL4 perfectly coincided with the genomic position of a neck blast resistance gene Pb2 previously identified from this line suggesting that the same gene confers resistance to leaf and neck blast. The present results were discussed in juxtaposition with past studies on the genes of Pita/Pita resistance gene complex.

摘要

越南籼稻地方品种‘Tetep’以其对稻瘟病的持久和广谱抗性而闻名于世。我们对 Tetep 衍生的重组自交系‘RIL4’进行了叶瘟抗性的遗传和分子分析,该品系对叶瘟和颈瘟均具有抗性。分离的 F 后代的表型分析表明,RIL4 中的叶瘟抗性由一个显性基因控制,该基因暂定命名为 Pi-l(t)。该基因被定位到染色体 12 着丝粒附近的 2.4cm 区域。在参考品种 Nipponbare 的等效基因组区域中寻找基因内容的过程中,发现了五个 NBS-LRR 基因,其中两个与先前从 Tetep 中鉴定的 Pita 和 Pi67 基因的等位基因相对应。另外两个基因 LOC_Os12g17090 和 LOC_Os12g17490 代表条锈病抗性基因 Yr10 的同源物。与 Pita2 和 Pi67 系的等位基因测试表明,RIL4 中的叶瘟抗性基因要么与其等位基因紧密连锁,要么与其等位基因紧密连锁。RIL4 中叶瘟抗性基因的基因组位置与先前从该系中鉴定的颈瘟抗性基因 Pb2 的基因组位置完全吻合,表明同一基因赋予对叶瘟和颈瘟的抗性。本研究结果与过去关于 Pita/Pita 抗性基因复合体基因的研究进行了讨论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c98d/10618204/fa59e418afcf/41598_2023_46070_Fig1_HTML.jpg

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本文引用的文献

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The broad-spectrum rice blast resistance (R) gene Pita2 encodes a novel R protein unique from Pita.
Rice (N Y). 2020 Mar 13;13(1):19. doi: 10.1186/s12284-020-00377-5.
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Mol Plant Microbe Interact. 2015 May;28(5):558-68. doi: 10.1094/MPMI-11-14-0367-R.

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