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文冠果叶际细菌群落对中国北方降水和温度格局的差异化响应。

Differentiated responses of the phyllosphere bacterial community of the yellowhorn tree to precipitation and temperature regimes across Northern China.

作者信息

Wang Weixiong, Hu Congcong, Chang Yu, Wang Libing, Bi Quanxin, Lu Xin, Zheng Zhimin, Zheng Xiaoqi, Wu Di, Niu Ben

机构信息

State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, China.

The Center for Basic Forestry Research, College of Forestry, Northeast Forestry University, Harbin, China.

出版信息

Front Plant Sci. 2023 Oct 25;14:1265362. doi: 10.3389/fpls.2023.1265362. eCollection 2023.

DOI:10.3389/fpls.2023.1265362
PMID:37954985
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10634255/
Abstract

INTRODUCTION

As an ephemeral and oligotrophic environment, the phyllosphere harbors many highly diverse microorganisms. Importantly, it is known that their colonization of plant leaf surfaces is considerably influenced by a few abiotic factors related to climatic conditions. Yet how the dynamics of phyllosphere bacterial community assembly are shaped by detailed climatological elements, such as various bioclimatic variables, remains poorly understood.

METHODS

Using high-throughput 16S rRNA gene amplicon sequencing technology, we analyzed the bacterial communities inhabiting the leaf surfaces of an oilseed tree, yellowhorn (), grown at four sites (Yinchuan, Otogqianqi, Tongliao, and Zhangwu) whose climatic status differs in northern China.

RESULTS AND DISCUSSION

We found that the yellowhorn phyllosphere's bacterial community was generally dominated by four phyla: Proteobacteria, Firmicutes, Actinobacteria, and Bacteroidetes. Nevertheless, bacterial community composition differed significantly among the four sampled site regions, indicating the possible impact of climatological factors upon the phyllosphere microbiome. Interestingly, we also noted that the α-diversities of phyllosphere microbiota showed strong positive or negative correlation with 13 bioclimatic factors (including 7 precipitation factors and 6 temperature factors). Furthermore, the relative abundances of 55 amplicon sequence variants (ASVs), including three ASVs representing two keystone taxa (the genera and ), exhibited significant yet contrary responses to the precipitation and temperature climatic variables. That pattern was consistent with all ASVs' trends of possessing opposite correlations to those two parameter classes. In addition, the total number of links and nodes, which conveys community network complexity, increased with rising values of most temperature variables. Besides that, remarkably positive relevance was found between average clustering coefficient and most precipitation variables. Altogether, these results suggest the yellowhorn phyllosphere bacterial community is capable of responding to variation in rainfall and temperature regimes in distinctive ways.

摘要

引言

作为一个短暂且贫营养的环境,叶际栖息着许多高度多样的微生物。重要的是,已知它们在植物叶表面的定殖受到一些与气候条件相关的非生物因素的显著影响。然而,叶际细菌群落组装的动态过程是如何由详细的气候要素(如各种生物气候变量)塑造的,仍知之甚少。

方法

利用高通量16S rRNA基因扩增子测序技术,我们分析了生长在中国北方四个气候状况不同的地点(银川、鄂托克前旗、通辽和彰武)的油用树种文冠果叶表面的细菌群落。

结果与讨论

我们发现文冠果叶际的细菌群落一般由四个门主导:变形菌门、厚壁菌门、放线菌门和拟杆菌门。然而,四个采样地点区域的细菌群落组成存在显著差异,表明气候因素可能对叶际微生物群有影响。有趣的是,我们还注意到叶际微生物群的α多样性与13个生物气候因素(包括7个降水因素和6个温度因素)呈强正相关或负相关。此外,55个扩增子序列变体(ASV)的相对丰度,包括代表两个关键分类群(属和属)的三个ASV,对降水和温度气候变量表现出显著但相反的响应。这种模式与所有ASV与这两个参数类别具有相反相关性的趋势一致。此外,传达群落网络复杂性的链接和节点总数随着大多数温度变量值的升高而增加。除此之外,平均聚类系数与大多数降水变量之间存在显著的正相关。总之,这些结果表明文冠果叶际细菌群落能够以独特的方式响应降雨和温度变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/c3cd669fbe37/fpls-14-1265362-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/9a636d315f05/fpls-14-1265362-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/059f0b74b067/fpls-14-1265362-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/941ff26b1fa8/fpls-14-1265362-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/09e4bfadee0d/fpls-14-1265362-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/ffd53b518c4d/fpls-14-1265362-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/c3cd669fbe37/fpls-14-1265362-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/9a636d315f05/fpls-14-1265362-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/059f0b74b067/fpls-14-1265362-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/941ff26b1fa8/fpls-14-1265362-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/09e4bfadee0d/fpls-14-1265362-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/ffd53b518c4d/fpls-14-1265362-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c70e/10634255/c3cd669fbe37/fpls-14-1265362-g006.jpg

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