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用于氧化物、氢氧化物和有机杂化材料直至微米尺度的原子模拟的精确力场。

Accurate Force Fields for Atomistic Simulations of Oxides, Hydroxides, and Organic Hybrid Materials up to the Micrometer Scale.

作者信息

Kanhaiya Krishan, Nathanson Michael, In 't Veld Pieter J, Zhu Cheng, Nikiforov Ilia, Tadmor Ellad B, Choi Yeol Kyo, Im Wonpil, Mishra Ratan K, Heinz Hendrik

机构信息

Department of Chemical and Biological Engineering, University of Colorado at Boulder, Boulder, Colorado 80309, United States.

BASF SE, Molecular Modeling & Drug Discovery, Carl Bosch Str. 38, 67056 Ludwigshafen, Germany.

出版信息

J Chem Theory Comput. 2023 Nov 28;19(22):8293-8322. doi: 10.1021/acs.jctc.3c00750. Epub 2023 Nov 14.

DOI:10.1021/acs.jctc.3c00750
PMID:37962992
Abstract

The simulation of metals, oxides, and hydroxides can accelerate the design of therapeutics, alloys, catalysts, cement-based materials, ceramics, bioinspired composites, and glasses. Here we introduce the INTERFACE force field (IFF) and surface models for α-AlO, α-CrO, α-FeO, NiO, CaO, MgO, β-Ca(OH), β-Mg(OH), and β-Ni(OH). The force field parameters are nonbonded, including atomic charges for Coulomb interactions, Lennard-Jones (LJ) potentials for van der Waals interactions with 12-6 and 9-6 options, and harmonic bond stretching for hydroxide ions. The models outperform DFT calculations and earlier atomistic models (Pedone, ReaxFF, UFF, CLAYFF) up to 2 orders of magnitude in reliability, compatibility, and interpretability due to a quantitative representation of chemical bonding consistent with other compounds across the periodic table and curated experimental data for validation. The IFF models exhibit average deviations of 0.2% in lattice parameters, <10% in surface energies (to the extent known), and 6% in bulk moduli relative to experiments. The parameters and models can be used with existing parameters for solvents, inorganic compounds, organic compounds, biomolecules, and polymers in IFF, CHARMM, CVFF, AMBER, OPLS-AA, PCFF, and COMPASS, to simulate bulk oxides, hydroxides, electrolyte interfaces, and multiphase, biological, and organic hybrid materials at length scales from atoms to micrometers. The nonbonded character of the models also enables the analysis of mixed oxides, glasses, and certain chemical reactions, and well-performing nonbonded models for silica phases, SiO, are introduced. Automated model building is available in the CHARMM-GUI Nanomaterial Modeler. We illustrate applications of the models to predict the structure of mixed oxides, and energy barriers of ion migration, as well as binding energies of water and organic molecules in outstanding agreement with experimental data and calculations at the CCSD(T) level. Examples of model building for hydrated, pH-sensitive oxide surfaces to simulate solid-electrolyte interfaces are discussed.

摘要

对金属、氧化物和氢氧化物进行模拟能够加速治疗药物、合金、催化剂、水泥基材料、陶瓷、仿生复合材料及玻璃的设计。在此,我们介绍用于α - AlO、α - CrO、α - FeO、NiO、CaO、MgO、β - Ca(OH)、β - Mg(OH)和β - Ni(OH)的INTERFACE力场(IFF)及表面模型。力场参数为非键合参数,包括用于库仑相互作用的原子电荷、具有12 - 6和9 - 6选项用于范德华相互作用的伦纳德 - 琼斯(LJ)势,以及用于氢氧根离子的谐振键拉伸。由于化学键的定量表示与元素周期表中的其他化合物一致且有经整理的实验数据用于验证,这些模型在可靠性、兼容性和可解释性方面比密度泛函理论(DFT)计算及早期原子模型(Pedone、ReaxFF、UFF、CLAYFF)高出多达2个数量级。相对于实验,IFF模型在晶格参数方面的平均偏差为0.2%,表面能方面(在已知范围内)小于10%,体模量方面为6%。这些参数和模型可与IFF、CHARMM、CVFF、AMBER、OPLS - AA、PCFF和COMPASS中用于溶剂、无机化合物、有机化合物、生物分子及聚合物的现有参数一起使用,以模拟从原子到微米长度尺度的块状氧化物、氢氧化物、电解质界面以及多相、生物和有机混合材料。模型的非键合特性还能够对混合氧化物、玻璃及某些化学反应进行分析,并且引入了适用于二氧化硅相SiO的性能良好的非键合模型。CHARMM - GUI纳米材料建模器中提供自动模型构建功能。我们展示了这些模型在预测混合氧化物结构、离子迁移能垒以及水和有机分子结合能方面的应用,结果与实验数据以及CCSD(T)水平的计算结果高度吻合。还讨论了用于模拟固体电解质界面的水合、pH敏感氧化物表面的模型构建示例。

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