Department of Cardiovascular Surgery, Second Affiliated Hospital of Zhejiang University, Hangzhou, China.
The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.
J Gene Med. 2024 Jan;26(1):e3626. doi: 10.1002/jgm.3626. Epub 2023 Nov 17.
Coronary heart disease is one of the most significant risk factors affecting human health worldwide. Its pathogenesis is intricate, with atherosclerosis being widely regarded as the leading cause. Aberrant lipid metabolism in macrophages is recognized as one of the triggering factors in atherosclerosis development. To investigate the role of macrophages in the formation of coronary artery atherosclerosis, we utilized single-cell data from wild-type mice obtained from the aortic roots and ascending aortas after long-term high-fat diet feeding, as deposited in GSE131776. Seurat software was employed to refine the single-cell data in terms of scale and cell types, facilitating the identification of differentially expressed genes. Through the application of differential expression genes, we conducted Gene Ontology and Kyoto Encyclopedia of Genes and Genomes functional enrichment analyses at 0, 8 and 16 weeks, aiming to uncover pathways with the most pronounced functional alterations as the high-fat diet progressed. The AddModuleScore function was employed to score the expression of these pathways across different cell types. Subsequently, macrophages were isolated and further subdivided into subtypes, followed by an investigation into intercellular communication within these subtypes. Subsequent to this, we induced THP-1 cells to generate foam cells, validating critical genes identified in prior studies. The results revealed that macrophages underwent the most substantial functional changes as the high-fat diet progressed. Furthermore, two clusters were identified as potentially playing pivotal roles in macrophage functional regulation during high-fat diet progression. Additionally, macrophage subtypes displayed intricate functionalities, with mutual functional counterbalances observed among these subtypes. The proportions of macrophage subtypes and the modulation of anti-inflammatory and pro-inflammatory functions played significant roles in the development of coronary artery atherosclerosis.
冠心病是影响全球人类健康的最重要的危险因素之一。其发病机制复杂,动脉粥样硬化被广泛认为是其主要病因。巨噬细胞中脂质代谢异常被认为是动脉粥样硬化发展的触发因素之一。为了研究巨噬细胞在冠状动脉粥样硬化形成中的作用,我们利用从长期高脂饮食喂养后的野生型小鼠主动脉根部和升主动脉获得的单细胞数据,这些数据已在 GSE131776 中存储。我们使用 Seurat 软件对单细胞数据进行了规模和细胞类型的精细化处理,从而鉴定差异表达基因。通过应用差异表达基因,我们在 0、8 和 16 周时进行了基因本体论和京都基因与基因组百科全书功能富集分析,旨在揭示随着高脂肪饮食进展,功能改变最明显的途径。我们使用 AddModuleScore 函数对这些途径在不同细胞类型中的表达进行评分。随后,我们分离出巨噬细胞并进一步细分为亚型,然后研究这些亚型之间的细胞间通讯。之后,我们诱导 THP-1 细胞生成泡沫细胞,验证了之前研究中确定的关键基因。结果表明,随着高脂肪饮食的进展,巨噬细胞发生了最大的功能变化。此外,鉴定出两个可能在高脂肪饮食进展过程中调节巨噬细胞功能的关键簇。此外,巨噬细胞亚型表现出复杂的功能,这些亚型之间存在相互的功能平衡。巨噬细胞亚型的比例和抗炎和促炎功能的调节在冠状动脉粥样硬化的发展中起着重要作用。