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对甘蔗(Saccharum spontaneum)中的 GTE 家族蛋白进行全基因组鉴定,揭示了 SsGTEL3a 赋予其耐旱性。

Genome-wide identification of GTE family proteins in sugarcane (Saccharum spontaneum) reveals that SsGTEL3a confers drought tolerance.

机构信息

State Key Lab for Conservation and Utilization of Subtropical Agri-Biological Resources, Guangxi Key Lab for Sugarcane Biology, College of Agriculture, Guangxi University, Nanning, 530004, China.

National Engineering Research Center for Sugarcane, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.

出版信息

Plant Physiol Biochem. 2023 Dec;205:108169. doi: 10.1016/j.plaphy.2023.108169. Epub 2023 Nov 11.

Abstract

The bromodomain is a highly conserved protein domain that specifically binds to acetylated lysine residues in histones, thereby activating transcription of target genes. Although some progress in Global Transcription Factor Group E (GTE) has been achieved in numerous animals and a few plant species, no systematic analysis of GTE gene families has been reported yet in sugarcane. In our study, 37 GTE and GTE-Like (GTEL) genes were characterized in the Saccharum spontaneum. All SsGTE/SsGTEL members were heterogeneously located on all chromosomes of the sugarcane genome and divided into five groups. Transcriptome data showed that SsGTEL3a was expressed at significantly higher levels under drought stress in drought-resistant varieties than in drought-sensitive varieties. Moreover, the overexpression of SsGTEL3a significantly improved the drought tolerance in Arabidopsis through improving the scavenging ability of reactive oxygen species. Additionally, an interaction between ScFAR1 and SsGTEL3a was identified, with ScFAR1 showing a positive response to drought stress in bacterium. In summary, this systematic analysis of GTE gene family in sugarcane and functional research of SsGTEL3a broadened deeper insight into their evolutionary dynamics and functional properties and provided new candidate genes for drought-resistant molecular breeding of sugarcane.

摘要

溴结构域是一种高度保守的蛋白质结构域,专门结合组蛋白上乙酰化的赖氨酸残基,从而激活靶基因的转录。尽管在许多动物和一些植物物种中已经对 Global Transcription Factor Group E (GTE) 取得了一些进展,但在甘蔗中尚未报道对 GTE 基因家族进行系统分析。在我们的研究中,在甜高粱中鉴定了 37 个 GTE 和 GTE-Like (GTEL) 基因。所有的 SsGTE/SsGTEL 成员在甘蔗基因组的所有染色体上都不均匀分布,并分为五个组。转录组数据显示,在耐旱品种中,SsGTEL3a 在干旱胁迫下的表达水平明显高于耐旱品种。此外,通过提高活性氧的清除能力,过表达 SsGTEL3a 可显著提高拟南芥的耐旱性。此外,还鉴定到 ScFAR1 和 SsGTEL3a 之间的相互作用,ScFAR1 在细菌中对干旱胁迫有正响应。总之,对甘蔗 GTE 基因家族的系统分析和 SsGTEL3a 的功能研究拓宽了对其进化动态和功能特性的深入了解,并为甘蔗抗旱分子育种提供了新的候选基因。

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