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水平获得 DNA 连接酶可提高真核生物的 DNA 损伤容忍度。

Horizontal acquisition of a DNA ligase improves DNA damage tolerance in eukaryotes.

机构信息

Université Libre de Bruxelles, Molecular Biology and Evolution, Brussels, 1050, Belgium.

Université de Namur, Laboratory of Evolutionary Genetics and Ecology, Namur, 5000, Belgium.

出版信息

Nat Commun. 2023 Nov 22;14(1):7638. doi: 10.1038/s41467-023-43075-8.

Abstract

Bdelloid rotifers are part of the restricted circle of multicellular animals that can withstand a wide range of genotoxic stresses at any stage of their life cycle. In this study, bdelloid rotifer Adineta vaga is used as a model to decipher the molecular basis of their extreme tolerance. Proteomic analysis shows that a specific DNA ligase, different from those usually involved in DNA repair in eukaryotes, is strongly over-represented upon ionizing radiation. A phylogenetic analysis reveals its orthology to prokaryotic DNA ligase E, and its horizontal acquisition by bdelloid rotifers and plausibly other eukaryotes. The fungus Mortierella verticillata, having a single copy of this DNA Ligase E homolog, also exhibits an increased radiation tolerance with an over-expression of this DNA ligase E following X-ray exposure. We also provide evidence that A. vaga ligase E is a major contributor of DNA breaks ligation activity, which is a common step of all important DNA repair pathways. Consistently, its heterologous expression in human cell lines significantly improves their radio-tolerance. Overall, this study highlights the potential of horizontal gene transfers in eukaryotes, and their contribution to the adaptation to extreme conditions.

摘要

蛭形轮虫是少数能够在生命周期的任何阶段耐受广泛遗传毒性应激的多细胞动物之一。在这项研究中,我们以蛭形轮虫 Adineta vaga 为模型,来解析其极端耐受的分子基础。蛋白质组分析表明,一种特殊的 DNA 连接酶,不同于真核生物中通常参与 DNA 修复的连接酶,在电离辐射下强烈过表达。系统发育分析揭示了它与原核生物 DNA 连接酶 E 的同源性,并且它是由蛭形轮虫和可能的其他真核生物水平获得的。具有单个 DNA Ligase E 同源物的真菌 Mortierella verticillata 也表现出增加的辐射耐受性,并且在 X 射线暴露后该 DNA Ligase E 的过表达。我们还提供了证据表明 A. vaga 的 ligase E 是 DNA 断裂连接活性的主要贡献者,这是所有重要的 DNA 修复途径的常见步骤。一致地,它在人细胞系中的异源表达显著提高了它们的放射耐受性。总的来说,这项研究强调了水平基因转移在真核生物中的潜力,以及它们对适应极端条件的贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f52a/10665377/fb5a0c2fc95b/41467_2023_43075_Fig1_HTML.jpg

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