Department of Internal Medicine, College of Life Sciences, Shanghai University, No. 381, Nanchen Road, Shanghai, 200444, China.
Department of Internal Medicine, Tongji Hospital Affiliated to Tongji University, Shanghai, 200092, China.
Ir J Med Sci. 2024 Jun;193(3):1223-1228. doi: 10.1007/s11845-023-03575-4. Epub 2023 Nov 23.
Acute coronary syndrome (ACS) is a category of cardiovascular disease with a high fatality rate.
We searched the differential expressed miRNAs (DEmiRNAs) in ACS based on bioinformatic analysis and investigated the diagnostic value of plasma miR-140-3p in patients with ACS and its potential functional role in ACS.
The miRNAs (GSE94605, GSE49823, and GSE185729) microarray datasets of ACS were downloaded from the GEO datasets. After integrating the miRNA and mRNA interaction, a protein-protein interaction (PPI) network was constructed with 36 overlapped target mRNAs using STRING database. The plasma levels of miR-140-3p were detected by RT-qPCR, and its clinical diagnostic value was evaluated using the ROC curve. The potential effects of the miR-140-3p/RHOA axis in ACS were explored using human coronary endothelial cells (HCAECs).
After overlapping the GEO datasets, miR-140-3p was identified in the microarray datasets of ACS. The plasma miR-140-3p expression levels were highly expressed in ACS patients than in healthy control and had diagnostic significance. The target mRNAs of miR-140-3p were predicted using TargetScan, miRWalk, TarBase, and miRDB databases. The PPI network identified ten hub genes. miR-140-3p could decrease the HCAECs' cell viability, while RHOA reversed the inhibition effect of miR-140-3p.
The plasma expression of miR-140-3p was upregulated in ACS patients. miR-140-3p could decrease the HCAECs' cell viability, while RHOA reversed the inhibition effect of miR-140-3p. The miR-140-3p may be a potential diagnostic biomarker for the early detection of ACS.
急性冠状动脉综合征(ACS)是一种死亡率较高的心血管疾病类别。
我们通过生物信息学分析搜索 ACS 中差异表达的 microRNA(DEmiRNA),并探讨血浆 miR-140-3p 在 ACS 患者中的诊断价值及其在 ACS 中的潜在功能作用。
从 GEO 数据集下载 ACS 的 microRNA(GSE94605、GSE49823 和 GSE185729)微阵列数据集。在整合 miRNA 和 mRNA 相互作用后,使用 STRING 数据库构建了包含 36 个重叠靶 mRNA 的蛋白质-蛋白质相互作用(PPI)网络。通过 RT-qPCR 检测血浆 miR-140-3p 水平,并使用 ROC 曲线评估其临床诊断价值。使用人冠状动脉内皮细胞(HCAEC)探索 miR-140-3p/RHOA 轴在 ACS 中的潜在影响。
重叠 GEO 数据集后,在 ACS 的 microarray 数据集中鉴定出 miR-140-3p。ACS 患者的血浆 miR-140-3p 表达水平明显高于健康对照组,具有诊断意义。使用 TargetScan、miRWalk、TarBase 和 miRDB 数据库预测 miR-140-3p 的靶基因。PPI 网络确定了十个枢纽基因。miR-140-3p 可降低 HCAEC 的细胞活力,而 RHOA 可逆转 miR-140-3p 的抑制作用。
ACS 患者血浆 miR-140-3p 表达上调。miR-140-3p 可降低 HCAEC 的细胞活力,而 RHOA 可逆转 miR-140-3p 的抑制作用。miR-140-3p 可能是 ACS 早期检测的潜在诊断生物标志物。