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计算与实验相结合:高效纤维状肽的鉴定

Computation meets experiment: identification of highly efficient fibrillating peptides.

作者信息

Sori Lorenzo, Pizzi Andrea, Bergamaschi Greta, Gori Alessandro, Gautieri Alfonso, Demitri Nicola, Soncini Monica, Metrangolo Pierangelo

机构信息

Laboratory of Supramolecular and BioNano Materials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano Via Luigi Mancinelli 7 20131 Milan Italy

Istituto di Scienze e Tecnologie Chimiche - National Research Council of Italy (SCITEC-CNR) 20131 Milan Italy.

出版信息

CrystEngComm. 2023 Jul 4;25(32):4503-4510. doi: 10.1039/d3ce00495c. eCollection 2023 Aug 14.

Abstract

Self-assembling peptides are of huge interest for biological, medical and nanotechnological applications. The enormous chemical variety that is available from the 20 amino acids offers potentially unlimited peptide sequences, but it is currently an issue to predict their supramolecular behavior in a reliable and cheap way. Herein we report a computational method to screen and forecast the aqueous self-assembly propensity of amyloidogenic pentapeptides. This method was found also as an interesting tool to predict peptide crystallinity, which may be of interest for the development of peptide based drugs.

摘要

自组装肽在生物学、医学和纳米技术应用方面具有巨大的研究价值。由20种氨基酸构成的巨大化学多样性提供了潜在无限的肽序列,但目前以可靠且经济的方式预测它们的超分子行为仍是一个问题。在此,我们报告一种计算方法,用于筛选和预测淀粉样五肽的水相自组装倾向。该方法还被发现是预测肽结晶度的一种有趣工具,这对于基于肽的药物开发可能具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1706/10424810/6a85a3e0da8e/d3ce00495c-f1.jpg

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