Department of Thoracic Surgery, Harbin Medical University Cancer Hospital, Harbin, Heilongjiang, China.
Department of Obstetrics and Gynecology, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.
Cancer Sci. 2024 Jan;115(1):109-124. doi: 10.1111/cas.16015. Epub 2023 Nov 27.
Lung adenocarcinoma (LUAD) is the most common subtype of lung cancer. Most patients are diagnosed at an advanced stage, therefore it is crucial to identify novel prognostic biomarkers for LUAD. As important regulatory cells, inducible regulatory T cells (iTregs) play a vital role in immune suppression and are important for the maintenance of immune homeostasis. This study explored the prognostic value and therapeutic effects of iTreg-related genes in LUAD. Data for LUAD patients, including immune infiltration data, RNA sequencing data, and clinical features, were acquired from The Cancer Genome Atlas, Gene Expression Omnibus, and Tumor Immune Single-cell Hub 2 databases. Immune-related subgroups with different infiltration patterns and iTreg-related genes were identified through univariate and multivariate Cox regression analyses and weighted correlation network analysis. Functional enrichment analyses were performed to explore the underlying mechanisms of iTreg-related genes. A prognostic risk signature was constructed using Cox regression analysis with the least absolute shrinkage and selection operator penalty. The ESTIMATE algorithm was applied to determine the immune status of LUAD patients. We applied the constructed signature to predict chemosensitivity and performed single-cell RNA sequencing analysis. The infiltration of iTregs was identified as an independent factor for predicting patient outcomes. We constructed a prognostic signature based on seven iTreg-related genes (GIMAP5, SLA, MS4A7, ZNF366, POU2AF1, MRPL12, and COL5A1), which was applied to subdivide patients into high- and low-risk subgroups. Our results revealed that patients in the iTreg-related low-risk subgroup had a better prognosis and possibly greater sensitivity to traditional chemotherapy. Our study provides a novel iTreg-related signature to elucidate the mechanisms underlying LUAD prognosis and promote individualized chemotherapy treatment.
肺腺癌(LUAD)是最常见的肺癌亚型。大多数患者在晚期被诊断出来,因此识别 LUAD 的新预后生物标志物至关重要。诱导性调节性 T 细胞(iTregs)作为重要的调节细胞,在免疫抑制中发挥重要作用,对于维持免疫稳态至关重要。本研究探讨了 iTreg 相关基因在 LUAD 中的预后价值和治疗效果。从癌症基因组图谱、基因表达综合数据库和肿瘤免疫单细胞图谱 2 数据库获取 LUAD 患者的包括免疫浸润数据、RNA 测序数据和临床特征的数据。通过单变量和多变量 Cox 回归分析和加权相关网络分析,确定具有不同浸润模式和 iTreg 相关基因的免疫相关亚群。通过功能富集分析探讨 iTreg 相关基因的潜在机制。使用 Cox 回归分析与最小绝对值收缩和选择算子惩罚构建预后风险签名。应用 ESTIMATE 算法确定 LUAD 患者的免疫状态。我们应用构建的签名来预测化疗敏感性,并进行单细胞 RNA 测序分析。iTreg 的浸润被确定为预测患者结局的独立因素。我们构建了一个基于七个 iTreg 相关基因(GIMAP5、SLA、MS4A7、ZNF366、POU2AF1、MRPL12 和 COL5A1)的预后签名,该签名可将患者分为高风险和低风险亚组。我们的结果表明,iTreg 相关低风险亚组的患者预后更好,可能对传统化疗更敏感。我们的研究提供了一个新的 iTreg 相关签名,以阐明 LUAD 预后的机制,并促进个体化化疗治疗。