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队列资料简介:德国社会经济面板创新样本(SOEP-G)中的遗传数据。

Cohort profile: Genetic data in the German Socio-Economic Panel Innovation Sample (SOEP-G).

机构信息

Department of Economics, School of Business and Economics, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.

Department of Economics, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.

出版信息

PLoS One. 2023 Nov 29;18(11):e0294896. doi: 10.1371/journal.pone.0294896. eCollection 2023.

Abstract

The German Socio-Economic Panel (SOEP) serves a global research community by providing representative annual longitudinal data of respondents living in private households in Germany. The dataset offers a valuable life course panorama, encompassing living conditions, socioeconomic status, familial connections, personality traits, values, preferences, health, and well-being. To amplify research opportunities further, we have extended the SOEP Innovation Sample (SOEP-IS) by collecting genetic data from 2,598 participants, yielding the first genotyped dataset for Germany based on a representative population sample (SOEP-G). The sample includes 107 full-sibling pairs, 501 parent-offspring pairs, and 152 triads, which overlap with the parent-offspring pairs. Leveraging the results from well-powered genome-wide association studies, we created a repository comprising 66 polygenic indices (PGIs) in the SOEP-G sample. We show that the PGIs for height, BMI, and educational attainment capture 22∼24%, 12∼13%, and 9% of the variance in the respective phenotypes. Using the PGIs for height and BMI, we demonstrate that the considerable increase in average height and the decrease in average BMI in more recent birth cohorts cannot be attributed to genetic shifts within the German population or to age effects alone. These findings suggest an important role of improved environmental conditions in driving these changes. Furthermore, we show that higher values in the PGIs for educational attainment and the highest math class are associated with better self-rated health, illustrating complex relationships between genetics, cognition, behavior, socio-economic status, and health. In summary, the SOEP-G data and the PGI repository we created provide a valuable resource for studying individual differences, inequalities, life-course development, health, and interactions between genetic predispositions and the environment.

摘要

德国社会经济面板调查(SOEP)通过提供德国私人家庭住户中受访者的代表性年度纵向数据,为全球研究界提供服务。该数据集提供了有价值的人生轨迹全景,包括生活条件、社会经济地位、家庭关系、个性特征、价值观、偏好、健康和幸福感。为了进一步扩大研究机会,我们通过从 2598 名参与者中收集遗传数据,扩展了 SOEP 创新样本(SOEP-IS),从而生成了第一个基于代表性人口样本(SOEP-G)的德国基因分型数据集。该样本包括 107 对全同胞、501 对亲子和 152 对三胞胎,与亲子对重叠。利用全基因组关联研究的有力结果,我们在 SOEP-G 样本中创建了一个包含 66 个多基因指数(PGI)的存储库。我们表明,身高、BMI 和受教育程度的 PGI 分别解释了各自表型的 22∼24%、12∼13%和 9%的方差。使用身高和 BMI 的 PGI,我们证明了最近几代人中平均身高的显著增加和平均 BMI 的下降不能归因于德国人口中的遗传变化或仅归因于年龄效应。这些发现表明,环境条件的改善在推动这些变化方面起着重要作用。此外,我们表明,PGI 中受教育程度和最高数学课的较高值与更好的自我报告健康状况相关,这说明了遗传、认知、行为、社会经济地位和健康之间的复杂关系。总之,SOEP-G 数据和我们创建的 PGI 存储库为研究个体差异、不平等、生命历程发展、健康以及遗传倾向和环境之间的相互作用提供了宝贵的资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a196/10686514/b917433dd379/pone.0294896.g001.jpg

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