School of Biological Science and Technology, University of Jinan, Jinan 250022, China.
Int J Mol Sci. 2023 Nov 23;24(23):16641. doi: 10.3390/ijms242316641.
The jacalin-related lectins (JRLs) are widely distributed in plants and are involved in plant development and multiple stress responses. However, the characteristics of the gene family at the genome-wide level and the roles of JRLs in barley's response to low-nitrogen (LN) stress have been rarely reported. In this study, 32 genes were identified and unevenly distributed at both ends of the seven chromosomes in barley. HvJRL proteins generally exhibited low sequence similarity but shared conserved jacalin domains by multiple sequence analysis. These proteins were classified into seven subfamilies based on phylogenetic analysis, with a similar gene structure and conserved motifs in the same subfamily. The promoters contained a large number of diverse -elements associated with hormonal response and stress regulation. Based on the phylogenetic relationships and functionally known JRL homologs, it was predicted that some have the potential to serve functions in multiple stress responses but not nutrition deficiency stress. Subsequently, nine differentially expressed genes (DEGs) encoding eight HvJRL proteins were identified in two barley genotypes with different LN tolerance by transcriptome analysis. Furthermore, transgenic Arabidopsis seedlings did enhance LN tolerance, which indicated that may be an important regulator of LN stress response (LNSR). The DEGs identified herein could provide new candidate genes for LN tolerance studies.
姜凝集素相关 lectins (JRLs) 广泛分布于植物中,参与植物的发育和多种胁迫响应。然而,关于该基因家族在全基因组水平上的特征以及 JRLs 在大麦对低氮 (LN) 胁迫响应中的作用,鲜有报道。本研究在大麦的 7 条染色体的两端鉴定到 32 个基因,这些基因不均匀分布。HvJRL 蛋白的序列相似性通常较低,但通过多序列分析共享保守的姜凝集素结构域。这些蛋白根据系统发育分析被分为 7 个亚家族,在同一亚家族中具有相似的基因结构和保守基序。启动子包含大量与激素反应和胁迫调控相关的不同的顺式作用元件。根据系统发育关系和功能已知的 JRL 同源物,预测其中一些具有在多种胁迫响应中发挥作用的潜力,但不具有在营养缺乏胁迫中发挥作用的潜力。随后,通过转录组分析在两个具有不同 LN 耐受性的大麦基因型中鉴定到 9 个编码 8 个 HvJRL 蛋白的差异表达基因 (DEGs)。此外,转拟南芥幼苗增强了 LN 耐受性,表明 可能是 LN 胁迫响应 (LNSR) 的一个重要调控因子。本文中鉴定的 DEGs 可为 LN 耐受性研究提供新的候选基因。