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大麦( L.)非生物胁迫耐受性相关转录因子家族的鉴定和功能表征。

Identification and Functional Characterization of Abiotic Stress Tolerance-Related Transcription Factor Family in Barley ( L.).

机构信息

Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.

National Barley Improvement Centre, Hangzhou 310021, China.

出版信息

Int J Mol Sci. 2024 Sep 23;25(18):10191. doi: 10.3390/ijms251810191.

Abstract

Plant AT-rich sequence and zinc-binding proteins (PLATZs) are a novel category of plant-specific transcription factors involved in growth, development, and abiotic stress responses. However, the gene family has not been identified in barley. In this study, a total of 11 were identified in barley, and they were unevenly distributed on five of the seven chromosomes. The phylogenetic tree, incorporating PLATZs from , rice, maize, wheat, and barley, could be classified into six clusters, in which HvPLATZs are absent in Cluster VI. exhibited conserved motif arrangements with a characteristic PLATZ domain. Two segmental duplication events were observed among . All were core genes present in 20 genotypes of the barley pan-genome. The coding sequences were conserved among 20 barley genotypes, whereas exhibited synonymous single nucleotide polymorphisms (SNPs); the remaining ones showed nonsynonymous variations. The expression of was ubiquitous in various tissues, whereas appeared transcriptionally silent; the remaining genes displayed tissue-specific expression. The expression of was modulated by salt stress, potassium deficiency, and osmotic stress, with response patterns being time-, tissue-, and stress type-dependent. The heterologous expression of in yeast enhanced tolerance to salt and osmotic stress, whereas the expression of compromised tolerance. These results advance our comprehension and facilitate further functional characterization of .

摘要

植物富含 AT 序列和锌结合蛋白(PLATZs)是一类新的植物特异性转录因子,参与生长、发育和非生物胁迫反应。然而,大麦中尚未鉴定出该基因家族。在本研究中,共鉴定出 11 个 ,它们不均匀地分布在七个染色体中的五个上。包含来自拟南芥、水稻、玉米、小麦和大麦的 PLATZs 的系统发育树可分为六个聚类,其中 HvPLATZs 不存在于聚类 VI 中。 表现出与特征 PLATZ 结构域一致的保守基序排列。在 之间观察到两个片段重复事件。所有 都是大麦泛基因组 20 个基因型中的核心基因。在 20 个大麦基因型中, 编码序列保守,而 表现出同义单核苷酸多态性(SNP);其余的则表现出非同义变异。在各种组织中普遍表达 ,而 表现出转录沉默;其余基因表现出组织特异性表达。 表达受盐胁迫、低钾和渗透胁迫的调节,响应模式随时间、组织和胁迫类型而变化。 在酵母中的异源表达增强了对盐和渗透胁迫的耐受性,而 的表达则降低了耐受性。这些结果提高了我们对 的理解,并有助于进一步对其进行功能表征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d3/11432580/85f55db62a46/ijms-25-10191-g001.jpg

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