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使用基于Petri网的模型分析治疗高血糖诱导动脉粥样硬化的关键治疗靶点。

Key Therapeutic Targets to Treat Hyperglycemia-Induced Atherosclerosis Analyzed Using a Petri Net-Based Model.

作者信息

Rybarczyk Agnieszka, Formanowicz Dorota, Formanowicz Piotr

机构信息

Institute of Computing Science, Poznan University of Technology, 60-695 Poznan, Poland.

Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.

出版信息

Metabolites. 2023 Dec 8;13(12):1191. doi: 10.3390/metabo13121191.

Abstract

Chronic superphysiological glucose concentration is a hallmark of diabetes mellitus (DM) and a cause of damage to many types of cells. Atherosclerosis coexists with glucose metabolism disturbances, constituting a significant problem and exacerbating its complications. Atherosclerosis in DM is accelerated, so it is vital to slow its progression. However, from the complex network of interdependencies, molecules, and processes involved, choosing which ones should be inhibited without blocking the pathways crucial for the organism's functioning is challenging. To conduct this type of analysis, in silicotesting comes in handy. In our study, to identify sites in the network that need to be blocked to have an inhibitory effect on atherosclerosis in hyperglycemia, which is toxic for the human organism, we created a model using Petri net theory and performed analyses. We have found that blocking isoforms of protein kinase C (PKC)-PKCβ and PKCγ-in diabetic patients can contribute to the inhibition of atherosclerosis progression. In addition, we have discovered that aldose reductase inhibition can slow down atherosclerosis progression, and this has been shown to reduce PKC (β and γ) expression in DM. It has also been observed that diminishing oxidative stress through the inhibitory effect on the AGE-RAGE axis may be a promising therapeutic approach in treating hyperglycemia-induced atherosclerosis. Moreover, the blockade of NADPH oxidase, the key enzyme responsible for the formation of reactive oxygen species (ROS) in blood vessels, only moderately slowed down atherosclerosis development. However, unlike aldose reductase blockade, or direct PKC (β and γ), the increased production of mitochondrial ROS associated with mitochondrial dysfunction effectively stopped after NADPH oxidase blockade. The results obtained may constitute the basis for further in-depth research.

摘要

慢性超生理浓度葡萄糖是糖尿病(DM)的一个标志,也是多种细胞受损的原因。动脉粥样硬化与葡萄糖代谢紊乱并存,构成了一个重大问题并加剧其并发症。糖尿病中的动脉粥样硬化进展加速,因此减缓其进展至关重要。然而,在涉及的相互依存关系、分子和过程的复杂网络中,选择哪些应该被抑制而不阻断对机体功能至关重要的途径具有挑战性。为了进行这类分析,硅基测试很有用。在我们的研究中,为了识别网络中需要被阻断以对高血糖中对人体有毒的动脉粥样硬化产生抑制作用的位点,我们使用Petri网理论创建了一个模型并进行了分析。我们发现,阻断糖尿病患者蛋白激酶C(PKC)的亚型——PKCβ和PKCγ——有助于抑制动脉粥样硬化进展。此外,我们发现醛糖还原酶抑制可以减缓动脉粥样硬化进展,并且已证明这可以降低糖尿病中PKC(β和γ)的表达。还观察到,通过对AGE-RAGE轴的抑制作用减轻氧化应激可能是治疗高血糖诱导的动脉粥样硬化的一种有前景的治疗方法。此外,阻断血管中负责活性氧(ROS)形成的关键酶NADPH氧化酶仅适度减缓了动脉粥样硬化的发展。然而,与醛糖还原酶阻断或直接阻断PKC(β和γ)不同,与线粒体功能障碍相关的线粒体ROS产生增加在NADPH氧化酶阻断后有效停止。所获得的结果可能构成进一步深入研究的基础。

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