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整合转录组和代谢组以探究γ-氨基丁酸对蓝莓组培苗的促生长机制。

Integrating transcriptome and metabolome to explore the growth-promoting mechanisms of GABA in blueberry plantlets.

作者信息

Liu Mingfeng, Bai Mingyue, Yue Jiajia, Fei Xiaoke, Xia Xiuying

机构信息

Plant Cell and Genetic Engineering Laboratory, School of Biological Engineering, Dalian University of Technology, Dalian, China.

出版信息

Front Plant Sci. 2023 Dec 21;14:1319700. doi: 10.3389/fpls.2023.1319700. eCollection 2023.

Abstract

Tissue culture technology is the main method for the commercial propagation of blueberry plants, but blueberry plantlets grow slowly and have long growth cycles under propagation, resulting in low propagation efficiency. In addition, the long culturing time can also result in reduced nutrient content in the culture medium, and the accumulation of toxic and harmful substances that can lead to weak growth for the plantlets or browning and vitrification, which ultimately can seriously reduce the quality of the plantlets. Gamma-aminobutyric acid (GABA) is a four-carbon non-protein amino acid that can improve plant resistance to various stresses and promote plant growth, but the effects of its application and mechanism in tissue culture are still unclear. In this study, the effects of GABA on the growth of blueberry plantlets were analyzed following the treatment of the plantlets with GABA. In addition, the GABA-treated plantlets were also subjected to a comparative transcriptomic and metabolomic analysis. The exogenous application of GABA significantly promoted growth and improved the quality of the blueberry plantlets. In total, 2,626 differentially expressed genes (DEGs) and 377 differentially accumulated metabolites (DAMs) were detected by comparison of the control and GABA-treated plantlets. Most of the DEGs and DAMs were involved in carbohydrate metabolism and biosynthesis of secondary metabolites. The comprehensive analysis results indicated that GABA may promote the growth of blueberry plantlets by promoting carbon metabolism and nitrogen assimilation, as well as increasing the accumulation of secondary metabolites such as flavonoids, steroids and terpenes.

摘要

组织培养技术是蓝莓植株商业繁殖的主要方法,但蓝莓组培苗在繁殖过程中生长缓慢且生长周期长,导致繁殖效率低下。此外,长时间培养还会导致培养基中养分含量降低,以及有毒有害物质的积累,进而致使组培苗生长衰弱或褐化、玻璃化,最终严重降低组培苗的质量。γ-氨基丁酸(GABA)是一种四碳非蛋白质氨基酸,能够提高植物对各种胁迫的抗性并促进植物生长,但其在组织培养中的应用效果及作用机制仍不清楚。在本研究中,对经GABA处理后的蓝莓组培苗进行了分析,以探究GABA对其生长的影响。此外,还对经GABA处理的组培苗进行了转录组和代谢组的比较分析。外源施加GABA显著促进了蓝莓组培苗的生长并提高了其质量。通过对对照和经GABA处理的组培苗进行比较,共检测到2626个差异表达基因(DEG)和377个差异积累代谢物(DAM)。大多数DEG和DAM参与碳水化合物代谢和次生代谢物的生物合成。综合分析结果表明,GABA可能通过促进碳代谢和氮同化以及增加黄酮类、甾体类和萜类等次生物质的积累来促进蓝莓组培苗的生长。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a60/10768180/bb37092a9cb5/fpls-14-1319700-g001.jpg

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