Duan Yanjun, Su Pengwei, Gu Yifei, Lv Xiaoyang, Cao Xiukai, Wang Shanhe, Yuan Zehu, Sun Wei
College of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
College of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Animals (Basel). 2024 Jan 3;14(1):161. doi: 10.3390/ani14010161.
This study aims to analyze the whole genome sequencing of F17 in antagonistic and susceptible Hu sheep lambs. The objective is to investigate the critical mutation loci in sheep and understand the genetic mechanism of sheep resistance to F17 at the genome level. Antagonist and susceptible venous blood samples were collected from Hu sheep lambs for whole genome sequencing and whole genome association analysis. A total of 466 genes with significant SNPs ( < 1.0 × 10) were found. GO and KEGG enrichment analysis and protein interaction network analysis were performed on these genes, and preliminary investigations showed that SNPs on CTNNB1, CDH8, APOD, HCLS1, Tet2, MTSS1 and YAP1 genes may be associated with the antagonism and susceptibility of Hu sheep lambs to F17. There are still some shortcomings that have not been explored via in vivo and in vitro functional experiments of the candidate genes, which will be our next research work. This study provides genetic loci and candidate genes for resistance of Hu sheep lambs to F17 infection, and provides a genetic basis for breeding disease-resistant sheep.
本研究旨在分析拮抗型和易感型湖羊羔羊中F17的全基因组测序情况。目的是探究绵羊中的关键突变位点,并在基因组水平上了解绵羊对F17抗性的遗传机制。从湖羊羔羊采集拮抗型和易感型静脉血样本进行全基因组测序和全基因组关联分析。共发现466个具有显著单核苷酸多态性(<1.0×10)的基因。对这些基因进行了基因本体论(GO)和京都基因与基因组百科全书(KEGG)富集分析以及蛋白质相互作用网络分析,初步研究表明,CTNNB1、CDH8、APOD、HCLS1、Tet2、MTSS1和YAP1基因上的单核苷酸多态性可能与湖羊羔羊对F17的拮抗和易感性有关。通过候选基因的体内和体外功能实验尚未探索到一些不足之处,这将是我们下一步的研究工作。本研究为湖羊羔羊抗F17感染提供了遗传位点和候选基因,为培育抗病绵羊提供了遗传基础。