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可计算表型用于 SARS-CoV-2 感染后后遗症:一项全国 COVID 队列协作分析。

Computable Phenotypes for Post-acute sequelae of SARS-CoV-2: A National COVID Cohort Collaborative Analysis.

机构信息

Program in Applied Mathematics, The University of Arizona, Tucson, AZ.

College of Engineering, The University of Arizona, Tucson, AZ.

出版信息

AMIA Annu Symp Proc. 2024 Jan 11;2023:589-598. eCollection 2023.

Abstract

Post-acute sequelae of SARS-CoV-2 (PASC) is an increasingly recognized yet incompletely understood public health concern. Several studies have examined various ways to phenotype PASC to better characterize this heterogeneous condition. However, many gaps in PASC phenotyping research exist, including a lack of the following: 1) standardized definitions for PASC based on symptomatology; 2) generalizable and reproducible phenotyping heuristics and meta-heuristics; and 3) phenotypes based on both COVID-19 severity and symptom duration. In this study, we defined computable phenotypes (or heuristics) and meta-heuristics for PASC phenotypes based on COVID-19 severity and symptom duration. We also developed a symptom profile for PASC based on a common data standard. We identified four phenotypes based on COVID-19 severity (mild vs. moderate/severe) and duration of PASC symptoms (subacute vs. chronic). The symptoms groups with the highest frequency among phenotypes were cardiovascular and neuropsychiatric with each phenotype characterized by a different set of symptoms.

摘要

新型冠状病毒(SARS-CoV-2)的急性后期(PASC)是一个日益受到关注但尚未完全了解的公共卫生问题。多项研究已经研究了各种方法来表型 PASC,以更好地描述这种异质的情况。然而,PASC 表型研究存在许多空白,包括以下几点:1)基于症状的 PASC 的标准化定义;2)可推广和可重复的表型启发式和元启发式;以及 3)基于 COVID-19 严重程度和症状持续时间的表型。在这项研究中,我们根据 COVID-19 严重程度和症状持续时间,为 PASC 表型定义了可计算的表型(或启发式)和元启发式。我们还根据常见数据标准为 PASC 开发了症状特征。我们根据 COVID-19 严重程度(轻度与中度/重度)和 PASC 症状持续时间(亚急性与慢性)确定了四种表型。表型中出现频率最高的症状组是心血管和神经精神症状,每个表型都有一组不同的症状。

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