Department of Medical Aspects of Specifc Environments, School of Basic Medicine, Anhui Medical University, Hefei, China.
Department of Occupational Health and Environment Health, School of Public Health, Anhui Medical University, Hefei, China.
Cell Biol Int. 2024 Apr;48(4):483-495. doi: 10.1002/cbin.12121. Epub 2024 Jan 18.
Idiopathic pulmonary fibrosis (IPF) is a progressive fibrotic disease of unknown pathogenic origin. Endoplasmic reticulum (ER) stress refers to the process by which cells take measures to ER function when the morphology and function of the reticulum are changed. Recent studies have demonstrated that the ER was involved in the evolution and progression of IPF. In this study, we obtained transcriptome data and relevant clinical information from the Gene Expression Omnibus database and conducted bioinformatics analysis. Among the 544 ER stress-related genes (ERSRGs), 78 were identified as differentially expressed genes (DEGs). These DEGs were primarily enriched in response to ER stress, protein binding, and protein processing. Two genes (HTRA2 and KTN1) were included for constructing an accurate molecular signature. The overall survival of patients was remarkably worse in the high-risk group than in the low-risk group. We further analyzed the difference in immune cells between high-risk and low-risk groups. M0 and M2 macrophages were significantly increased in the high-risk group. Our results suggested that ERSRGs might play a critical role in the development of IPF by regulating the immune microenvironment in the lungs, which provide new insights on predicting the prognosis of patients with IPF.
特发性肺纤维化(IPF)是一种病因不明的进行性纤维性肺疾病。内质网(ER)应激是指当网的形态和功能发生变化时,细胞采取措施来维持 ER 功能的过程。最近的研究表明,内质网参与了 IPF 的发生和发展。在这项研究中,我们从基因表达综合数据库中获得了转录组数据和相关的临床信息,并进行了生物信息学分析。在 544 个与 ER 应激相关的基因(ERSRGs)中,有 78 个被鉴定为差异表达基因(DEGs)。这些 DEGs 主要富集在对 ER 应激、蛋白质结合和蛋白质加工的反应中。我们选择了两个基因(HTRA2 和 KTN1)来构建准确的分子特征。高危组患者的总生存率明显低于低危组。我们进一步分析了高危组和低危组之间免疫细胞的差异。高危组中 M0 和 M2 巨噬细胞显著增加。我们的结果表明,ERSRGs 可能通过调节肺部的免疫微环境在 IPF 的发展中起关键作用,为预测 IPF 患者的预后提供了新的见解。