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1987年阿季洛夫、卡梅林和马哈梅多夫所描述的(唇形科)物种的叶绿体全基因组序列,费尔干纳谷地的一个特有物种。

The complete chloroplast genome sequence of Adylov, Kamelin & Makhmedov 1987 (Lamiaceae), an endemic species of Fergana Valley.

作者信息

Park Min-Su, Na Nu-Ree, Jang Chang-Gee, Gulomov Rustam, Tojibaev Komiljon

机构信息

International Biological Material Research Center, Korea Research Instituto of Bioscience and Biotechnology, Daejeon, Republic of Korea.

Department of Biology Education, Kongju National University, Kongju, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2024 Jan 16;9(1):104-108. doi: 10.1080/23802359.2023.2292159. eCollection 2024.

Abstract

Adylov, Kamelin & Makhmedov 1987 is one of the poorly studied narrow endemics of Fergana Valley, one of Central Asia's most densely human-populated regions. In this study, we sequenced, assembled, and characterized the complete plastome of by using high-throughput Illumina reads. The complete chloroplast genome consisted of 151,324 bp, including a large single-copy (LSC) region (82,775 bp), a small single-copy (SSC) region (17,357 bp), and two inverted repeat regions (25,596 bp each). In the chloroplast genome of , 133 genes were detected, comprising 88 protein-encoding genes, eight ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The phylogenetic analysis indicated that the genetic relationship between and was very close. This study provides basic information to explore the molecular evolution of the genus and the Lamiaceae family.

摘要

阿迪洛夫、卡梅林和马赫梅多夫1987年(发表的研究)是费尔干纳谷地鲜为人知的狭域特有种之一,费尔干纳谷地是中亚人口最为密集的地区之一。在本研究中,我们利用高通量Illumina测序 reads对(该物种)进行了测序、组装并对其完整的质体基因组进行了特征分析。完整的叶绿体基因组由151,324 bp组成,包括一个大单拷贝(LSC)区域(82,775 bp)、一个小单拷贝(SSC)区域(17,357 bp)和两个反向重复区域(各25,596 bp)。在(该物种)的叶绿体基因组中,检测到133个基因,包括88个蛋白质编码基因、8个核糖体RNA(rRNA)基因和37个转运RNA(tRNA)基因。系统发育分析表明,(该物种)与(另一物种)之间的亲缘关系非常密切。本研究为探索(该物种所属)属以及唇形科的分子进化提供了基础信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e2dd/10795634/0bd5ce554229/TMDN_A_2292159_F0001_C.jpg

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