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唇形科一种传统藏药的完整叶绿体基因组。

The complete chloroplast genome of (Lamiaceae), a traditional Tibetan medicinal herb.

作者信息

Min Dao-Zhang, Zhao Fei, Zhang Qiong, Li Bo

机构信息

Research Centre of Ecological Sciences, College of Agronomy, Jiangxi Agricultural University, Nanchang, PR China.

CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 24;6(3):1186-1188. doi: 10.1080/23802359.2021.1902413.

DOI:10.1080/23802359.2021.1902413
PMID:33796781
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7995819/
Abstract

The species is a medicinal herb mainly distributed in southwest China. The first complete plastid genome sequence of reported here was 151,747 bp long, with the large single copy (LSC) region of 83,181 bp, the small single copy (SSC) region of 17,372 bp and two inverted repeats (IRa and IRb) of 25,597 bp. The plastome contained 114 genes, including 80 protein-coding genes, four encoding rRNAs, and 30 encoding tRNAs. The overall GC content was 38.5%. Phylogenetic analysis of Lamiaceae based on a whole plastome matrix suggested that is closely related to the genus as members of subfamily Lamioideae.

摘要

该物种是一种主要分布于中国西南部的药用草本植物。本文报道的其首个完整质体基因组序列长度为151,747 bp,其中大单拷贝(LSC)区域为83,181 bp,小单拷贝(SSC)区域为17,372 bp,两个反向重复序列(IRa和IRb)各为25,597 bp。该质体基因组包含114个基因,其中包括80个蛋白质编码基因、4个rRNA编码基因和30个tRNA编码基因。总体GC含量为38.5%。基于整个质体基因组矩阵对唇形科进行的系统发育分析表明,该物种作为野芝麻亚科的成员与[具体属名]属密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ee/7995819/748a699d7fe9/TMDN_A_1902413_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ee/7995819/748a699d7fe9/TMDN_A_1902413_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ee/7995819/748a699d7fe9/TMDN_A_1902413_F0001_B.jpg

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引用本文的文献

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本文引用的文献

1
The complete chloroplast genome of (Lamiaceae), a traditional Tibetan medicinal herb.唇形科一种传统藏药草的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2019 Dec 9;5(1):75-76. doi: 10.1080/23802359.2019.1696248.
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